RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA451191" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA451191 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
441181 441181 PRJNA451191_P_NODE_56501_length_193_cov_2.818182_g56230_i0 PRJNA451191 56501 193 2.818182 5.43909126 Bradybaena similaris 145626 Mollusca Mollusca 67.6 5.94e-7   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g56230 i0 91.667 0.606217616580311 48 4 25 0 79 126 6130645 6130598 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 117 67.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
8093177 8093177 PRJNA451191_P_NODE_19707_length_324_cov_1.281369_g19436_i0 PRJNA451191 19707 324 1.281369 4.15163556 Octopus sinensis 2607531 Mollusca Mollusca 52.8 0.03   NTclustered gi|1914667193|ref|XR_003882023.2| 2607531 g19436 i0 100 0.0864197530864197 28 0 9 0 268 295 46 19 PREDICTED: Octopus sinensis uncharacterized LOC115215939 (LOC115215939), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
9368802 9368802 PRJNA451191_P_NODE_47828_length_209_cov_0.878378_g47557_i0 PRJNA451191 47828 209 0.878378 1.83581002 Magallana gigas 29159 Mollusca Mollusca 56.5 0.001   NTclustered gi|2751252164|ref|XM_034481740.2| 29159 g47557 i0 96.97 0.157894736842105 33 1 16 0 177 209 294 262 PREDICTED: Magallana gigas cathepsin Z (LOC105327153), mRNA blastn 33 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas
10644172 10644172 PRJNA451191_P_NODE_27249_length_272_cov_1.943128_g26978_i0 PRJNA451191 27249 272 1.943128 5.28530816 Mya arenaria 6604 Mollusca Mollusca 102 2.44e-17   NTclustered gi|2427439094|ref|XR_008259591.1| 6604 g26978 i0 90 28.7830882352941 80 6 29 2 194 272 3591 3669 PREDICTED: Mya arenaria large subunit ribosomal RNA (LOC128224964), rRNA blastn 7829 102 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria
13194563 13194563 PRJNA451191_P_NODE_48751_length_208_cov_0.884354_g48480_i0 PRJNA451191 48751 208 0.884354 1.83945632 Apoecus ramelauensis 1918943 Mollusca Mollusca 324 3.5e-84   NTclustered gi|1108658002|gb|KX015964.1| 1918943 g48480 i0 94.712 170.379807692308 208 11 100 0 1 208 3671 3464 Apoecus ramelauensis voucher AM C.488753 28S ribosomal RNA gene, partial sequence blastn 35439 324 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Apoecus Apoecus ramelauensis
16395317 16395317 PRJNA451191_P_NODE_43833_length_214_cov_3.627451_g43562_i0 PRJNA451191 43833 214 3.627451 7.76274514 Ctena 102298 Mollusca Mollusca 115 2.3700000000000003e-21   NTclustered gi|2125838800|gb|OL183269.1| 881210 g43562 i0 92.5 1.1214953271028 80 6 37 0 1 80 4121 4042 Ctena bella voucher UF437018 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 240 115 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Lucinida Lucinidae Ctena Ctena bella
17018079 17018079 PRJNA451191_P_NODE_42034_length_219_cov_3.253165_g41763_i0 PRJNA451191 42034 219 3.253165 7.12443135 Octopus sinensis 2607531 Mollusca Mollusca 52.8 0.019   NTclustered gi|1914663783|ref|XM_029783294.2| 2607531 g41763 i0 96.774 0.707762557077626 31 1 14 0 37 67 5368 5338 PREDICTED: Octopus sinensis phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like (LOC115214194), transcript variant X3, mRNA blastn 155 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;