RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA451191" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA451191 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12571618 12571618 PRJNA451191_P_NODE_49450_length_207_cov_0.890411_g49179_i0 PRJNA451191 49450 207 0.890411 1.84315077 root 1 Root_unresolved Root_unresolved 377 2.63e-100   NTclustered gi|2915026475|gb|OR222618.1| 2832643 g49179 i0 99.517 31.9275362318841 207 1 100 0 1 207 85684 85478 MAG: Caudoviricetes sp. isolate MSP0313 genomic sequence blastn 6609 377 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
18944241 18944241 PRJNA451191_P_NODE_57315_length_175_cov_4.052632_g57044_i0 PRJNA451191 57315 175 4.052632 7.092106 root 1 Root_unresolved Root_unresolved 324 2.83e-84   NTclustered gi|2915034053|gb|OR222678.1| 2832643 g57044 i0 100 74.5142857142857 175 0 100 0 1 175 30212 30386 MAG: Caudoviricetes sp. isolate MSP0255 genomic sequence blastn 13040 324 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19566820 19566820 PRJNA451191_P_NODE_50656_length_206_cov_0.896552_g50385_i0 PRJNA451191 50656 206 0.896552 1.84689712 Ackermannviridae sp. 2831612 Viruses Viruses 327 2.6700000000000003e-85   NTclustered gi|2054414365|tpg|BK035606.1| 2831612 g50385 i0 98.907 2.88349514563107 183 2 89 0 1 183 45355 45537 MAG TPA_asm: Ackermannviridae sp. isolate ctt2V4, partial genome blastn 594 327 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Ackermannviridae   Ackermannviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;