RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA451191" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA451191 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1092759 1092759 PRJNA451191_P_NODE_6901_length_598_cov_3.104283_g6634_i0 PRJNA451191 6901 598 3.104283 18.56361234 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.016   NTclustered gi|2785757308|ref|XM_067215750.1| 5824 g6634 i0 100 0.096989966555184 29 0 5 0 570 598 883 911 Plasmodium brasilianum Cg2 protein (MKS88_000468), partial mRNA blastn 58 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
10644470 10644470 PRJNA451191_P_NODE_35909_length_237_cov_3.272727_g35638_i0 PRJNA451191 35909 237 3.272727 7.75636299 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 438 1.4e-118   NTclustered gi|325195057|emb|FR825852.1| 890382 g35638 i0 100 95.6919831223629 237 0 100 0 1 237 166 402 Albugo laibachii Nc14, genomic contig CONTIG_2891_NC14_v4_540_391 blastn 22679 438 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
17017544 17017544 PRJNA451191_P_NODE_26154_length_278_cov_1.695853_g25883_i0 PRJNA451191 26154 278 1.695853 4.71447134 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 497 2.73e-136   NTclustered gi|937408816|ref|NC_027966.1| 114742 g25883 i0 98.921 104.478417266187 278 3 100 0 1 278 11293 11016 Pythium insidiosum mitochondrial DNA, complete genome blastn 29045 497 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
17670372 17670372 PRJNA451191_P_NODE_56074_length_196_cov_4.577778_g55803_i0 PRJNA451191 56074 196 4.577778 8.97244488 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 339 1.16e-88   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g55803 i0 97.949 75.9795918367347 195 4 99 0 2 196 269 463 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 14892 339 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20842751 20842751 PRJNA451191_P_NODE_53797_length_203_cov_0.915493_g53526_i0 PRJNA451191 53797 203 0.915493 1.85845079 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 364 2e-96   NTclustered gi|937408816|ref|NC_027966.1| 114742 g53526 i0 99.015 103.448275862069 203 2 100 0 1 203 10572 10370 Pythium insidiosum mitochondrial DNA, complete genome blastn 21000 364 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
23393371 23393371 PRJNA451191_P_NODE_56459_length_193_cov_4.681818_g56188_i0 PRJNA451191 56459 193 4.681818 9.03590874 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|1620167712|ref|XM_028681606.1| 880535 g56188 i0 94.444 0.186528497409326 36 1 18 1 32 66 15000 14965 Plasmodium sp. gorilla clade G2 E3 ubiquitin-protein ligase, putative (PADL01_0825300), partial mRNA blastn 36 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;