RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA451191" and tax_clade = "Luna-1 subcluster"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 3 ✖

bioproject 1

  • PRJNA451191 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2990927 2990927 PRJNA451191_P_NODE_27063_length_273_cov_2.014151_g26792_i0 PRJNA451191 27063 273 2.014151 5.49863223 Rhodoluna sp. KAS3 942880 Bacteria Bacteria 455 1.6300000000000002e-123   NTclustered gi|2318877619|dbj|AP026910.1| 942880 g26792 i0 96.703 168.120879120879 273 9 100 0 1 273 454244 453972 Rhodoluna sp. KAS3 DNA, complete genome blastn 45897 455 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna sp. KAS3
4920819 4920819 PRJNA451191_P_NODE_28444_length_266_cov_4.668293_g28173_i0 PRJNA451191 28444 266 4.668293 12.41765938 Rhodoluna 529883 Bacteria Bacteria 464 2.64e-126   NTclustered gi|1666461687|gb|CP040509.1| 232537 g28173 i0 98.12 158.46992481203 266 5 100 0 1 266 477046 477311 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 42153 464 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila
7470756 7470756 PRJNA451191_P_NODE_9626_length_491_cov_3.141860_g9356_i0 PRJNA451191 9626 491 3.14186 15.4265326 Rhodoluna 529883 Bacteria Bacteria 797 0   NTclustered gi|1666461687|gb|CP040509.1| 232537 g9356 i0 95.951 196.08350305499 494 14 100 5 1 491 477674 478164 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 96277 797 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;