RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA451191" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA451191 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2991675 2991675 PRJNA451191_P_NODE_51203_length_205_cov_1.805556_g50932_i0 PRJNA451191 51203 205 1.805556 3.7013898 Planktothrix pseudagardhii 132604 Bacteria Bacteria 58.4 3.85e-4   NTclustered gi|2261189783|emb|LR882967.1| 132604 g50932 i0 88 0.404878048780488 50 4 24 2 20 68 3832862 3832910 Planktothrix pseudagardhii strain No.713 genome assembly, chromosome: I blastn 83 58.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Microcoleaceae Planktothrix Planktothrix pseudagardhii
15743121 15743121 PRJNA451191_P_NODE_32553_length_249_cov_2.484043_g32282_i0 PRJNA451191 32553 249 2.484043 6.18526707 cyanobacterium endosymbiont of Rhopalodia gibberula 1763363 Bacteria Bacteria 52.8 0.023   NTclustered gi|1264230396|dbj|AP018341.1| 1763363 g32282 i0 100 0.112449799196787 28 0 11 0 77 104 2920965 2920992 Cyanobacterium endosymbiont of Rhopalodia gibberula DNA, complete genome, isolate: RgSB blastn 28 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         cyanobacterium endosymbiont of Rhopalodia gibberula

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;