RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA450632" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA450632 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1092527 1092527 PRJNA450632_P_NODE_12881_length_226_cov_2.167539_g12702_i0 PRJNA450632 12881 226 2.167539 4.89863814 Pleosporaceae 28556 Fungi Fungi 418 1.7199999999999998e-112   NTclustered gi|2708114021|gb|OR695074.1| 5016 g12702 i0 100 99.9734513274336 226 0 100 0 1 226 3158 2933 Bipolaris maydis isolate ZM358 mitochondria, complete genome blastn 22594 418 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Bipolaris Bipolaris maydis
3643565 3643565 PRJNA450632_P_NODE_2783_length_648_cov_11.934747_g2629_i0 PRJNA450632 2783 648 11.934747 77.33716056 Plenodomus 118259 Fungi Fungi 1029 0   NTclustered gi|2220840071|gb|ON193818.1| 220672 g2629 i0 95.37 116.918209876543 648 28 100 2 1 648 532 1177 Leptosphaeria biglobosa strain UNIJAG.PL.OP626 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 75763 1035 0.994202898550725 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Plenodomus Plenodomus biglobosus
6195562 6195562 PRJNA450632_P_NODE_11085_length_250_cov_5.618605_g10906_i0 PRJNA450632 11085 250 5.618605 14.0465125 Ascomycota 4890 Fungi Fungi 433 6.92e-117   NTclustered gi|480326928|gb|JX507651.1| 177207 g10906 i0 97.992 99.268 249 5 99 0 1 249 1407 1655 Coniochaeta mutabilis isolate 57 large subunit ribosomal RNA gene, partial sequence blastn 24817 433 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Coniochaetales Coniochaetaceae Coniochaeta Coniochaeta mutabilis
7470529 7470529 PRJNA450632_P_NODE_4586_length_465_cov_11.634884_g2629_i1 PRJNA450632 4586 465 11.634884 54.1022106 Pleosporaceae 28556 Fungi Fungi 715 0   NTclustered gi|1473260689|gb|MH873633.1| 45303 g2629 i1 98.756 86.4924731182796 402 5 86 0 1 402 625 224 Alternaria infectoria culture CBS:210.86 strain CBS 210.86 large subunit ribosomal RNA gene, partial sequence blastn 40219 715 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria infectoria
8745550 8745550 PRJNA450632_P_NODE_7587_length_325_cov_4.834483_g7408_i0 PRJNA450632 7587 325 4.834483 15.71206975 Dothideomycetes 147541 Fungi Fungi 573 5.269999999999998e-159   NTclustered gi|2791117515|gb|PQ217832.1| 5599 g7408 i0 98.462 129.658461538462 325 5 100 0 1 325 5584 5260 Alternaria alternata isolate Karbala-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and external transcribed spacer, partial sequence blastn 42139 573 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
9367360 9367360 PRJNA450632_P_NODE_23268_length_153_cov_1.644068_g23089_i0 PRJNA450632 23268 153 1.644068 2.51542404 Idriella lunata 1446843 Fungi Fungi 261 1.91e-65   NTclustered gi|2532687039|gb|OR243767.1| 1446843 g23089 i0 97.386 101.019607843137 153 4 100 0 1 153 3745 3897 Idriella lunata strain DSM 104378 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15456 261 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Microdochiaceae Idriella Idriella lunata
11295684 11295684 PRJNA450632_P_NODE_23889_length_151_cov_1.155172_g23710_i0 PRJNA450632 23889 151 1.155172 1.74430972 Penicillium 5073 Fungi Fungi 246 5.27e-61   NTclustered gi|225134683|gb|FJ345355.1| 5076 g23710 i0 96.026 104.774834437086 151 6 100 0 1 151 3650 3800 Penicillium chrysogenum strain ATCC 10108 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15821 246 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium chrysogenum
13192997 13192997 PRJNA450632_P_NODE_22611_length_156_cov_1.099174_g22432_i0 PRJNA450632 22611 156 1.099174 1.71471144 Lipomyces tetrasporus 54092 Fungi Fungi 102 1.26e-17   NTclustered gi|2507646107|ref|XM_056189477.1| 54092 g22432 i0 80.147 0.871794871794872 136 27 87 0 21 156 94 229 Lipomyces tetrasporus 50S ribosomal protein L30e-like protein (POJ06DRAFT_270956), partial mRNA blastn 136 102 1 Eukaryota Opisthokonta Fungi Ascomycota Lipomycetes Lipomycetales Lipomycetaceae Lipomyces Lipomyces tetrasporus
13846055 13846055 PRJNA450632_P_NODE_14931_length_205_cov_1.723529_g14752_i0 PRJNA450632 14931 205 1.723529 3.53323445 Pleosporaceae 28556 Fungi Fungi 357 3.3899999999999996e-94   NTclustered gi|2708114021|gb|OR695074.1| 5016 g14752 i0 98.049 100.936585365854 205 4 100 0 1 205 99153 98949 Bipolaris maydis isolate ZM358 mitochondria, complete genome blastn 20692 357 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Bipolaris Bipolaris maydis
18943999 18943999 PRJNA450632_P_NODE_10015_length_268_cov_6.261803_g9836_i0 PRJNA450632 10015 268 6.261803 16.78163204 Eukaryota 2759 Fungi Fungi 473 4.419999999999999e-129   NTclustered gi|636665454|gb|KJ561270.1| 175243 g9836 i0 98.507 100.003731343284 268 4 100 0 1 268 74 341 Uncultured soil ascomycete clone P5 18S ribosomal RNA gene, partial sequence blastn 26801 473 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
20218747 20218747 PRJNA450632_P_NODE_18196_length_180_cov_1.137931_g18017_i0 PRJNA450632 18196 180 1.137931 2.0482758 Plenodomus 118259 Fungi Fungi 111 2.48e-20   NTclustered gi|702068343|emb|FO906979.1| 225338 g18017 i0 85.185 15.2555555555556 108 16 60 0 54 161 56690 56797 Leptosphaeria maculans brassicae wa74_scaffold00107 complete sequence blastn 2746 111 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Plenodomus Plenodomus biglobosus
21494402 21494402 PRJNA450632_P_NODE_23757_length_151_cov_1.715517_g23578_i0 PRJNA450632 23757 151 1.715517 2.59043067 Pleosporaceae 28556 Fungi Fungi 279 5.19e-71   NTclustered gi|944204212|gb|KR912319.1| 45303 g23578 i0 100 100 151 0 100 0 1 151 426 576 Alternaria infectoria strain FF34 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15100 279 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria infectoria
24044399 24044399 PRJNA450632_P_NODE_21079_length_163_cov_1.164062_g20900_i0 PRJNA450632 21079 163 1.164062 1.89742106 Xylariales 37989 Fungi Fungi 291 2.64e-74   NTclustered gi|1128694457|gb|KY020436.1| 1932614 g20900 i0 98.773 100.19018404908 163 2 100 0 1 163 1015 853 Halocryptovalsa avicenniae isolate MD1341 28S ribosomal RNA gene, partial sequence blastn 16331 291 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Diatrypaceae Halocryptovalsa Halocryptovalsa avicenniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;