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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA450632" and tax_clade = "Sar"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

bioproject 1

  • PRJNA450632 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
439489 439489 PRJNA450632_P_NODE_23401_length_153_cov_1.016949_g23222_i0 PRJNA450632 23401 153 1.016949 1.55593197 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 156 9.29e-34   NTclustered gi|2795032670|ref|XM_067933158.1| 4785 g23222 i0 85.256 2.05228758169935 156 17 100 5 1 153 187 339 Phytophthora cinnamomi Mitochondrial Carrier (MC) Family (IUM83_08765), partial mRNA blastn 314 156 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
11295680 11295680 PRJNA450632_P_NODE_22309_length_157_cov_1.459016_g22130_i0 PRJNA450632 22309 157 1.459016 2.29065512 Tribonema 2980 SAR_Eukaryotes SAR_Eukaryotes 274 2.54e-69   NTclustered gi|176113|gb|M55286.1|TBNRR16S 2981 g22130 i0 98.089 100.796178343949 157 3 100 0 1 157 766 922 Tribonema aequale 16S ribosomal (small subunit) RNA blastn 15825 274 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema aequale
11918102 11918102 PRJNA450632_P_NODE_19710_length_170_cov_1.474074_g19531_i0 PRJNA450632 19710 170 1.474074 2.5059258 Tribonema sp. 2679974 SAR_Eukaryotes SAR_Eukaryotes 281 1.67e-71   NTclustered gi|2518133535|gb|OQ243223.1| 2679974 g19531 i0 96.471 23.2411764705882 170 6 100 0 1 170 6154 5985 Tribonema sp. strain GXU-A10 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and 28S-18S ribosomal RNA intergenic spacer, complete sequence blastn 3951 281 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema sp.
13846060 13846060 PRJNA450632_P_NODE_16051_length_196_cov_0.975155_g15872_i0 PRJNA450632 16051 196 0.975155 1.9113038 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 298 1.97e-76   NTclustered gi|2307923332|ref|NC_066457.1| 3016 g15872 i0 94.33 148.867346938776 194 11 99 0 3 196 76731 76538 Sargassum fulvellum chloroplast, complete genome blastn 29178 300 0.993333333333333 Eukaryota Sar     Phaeophyceae Fucales Sargassaceae Sargassum Sargassum fulvellum
13846082 13846082 PRJNA450632_P_NODE_21231_length_162_cov_1.322835_g21052_i0 PRJNA450632 21231 162 1.322835 2.1429927 Tribonema 2980 SAR_Eukaryotes SAR_Eukaryotes 289 9.44e-74   NTclustered gi|2286039|emb|Y07979.1| 2981 g21052 i0 98.773 99.6172839506173 163 1 100 1 1 162 1320 1158 T.aequale 28S rRNA gene and ITS2 DNA blastn 16138 289 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema aequale
17016645 17016645 PRJNA450632_P_NODE_19154_length_174_cov_1.100719_g18975_i0 PRJNA450632 19154 174 1.100719 1.91525106 Tribonema aequale 2981 SAR_Eukaryotes SAR_Eukaryotes 311 2.19e-80   NTclustered gi|2286039|emb|Y07979.1| 2981 g18975 i0 98.851 99.1666666666667 174 2 100 0 1 174 912 739 T.aequale 28S rRNA gene and ITS2 DNA blastn 17255 311 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema aequale
22769468 22769468 PRJNA450632_P_NODE_14958_length_205_cov_1.294118_g14779_i0 PRJNA450632 14958 205 1.294118 2.6529419 Tribonematales 2978 SAR_Eukaryotes SAR_Eukaryotes 374 3.3599999999999997e-99   NTclustered gi|1591446687|gb|MK005105.1| 303373 g14779 i0 99.512 167.453658536585 205 1 100 0 1 205 192 396 Tribonema affine isolate S2F4-16 23S ribosomal RNA gene, partial sequence; chloroplast blastn 34328 374 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema affine

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;