RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA450343" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA450343 · 25 ✖

analysis 1

  • blastn · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
439079 439079 PRJNA450343_P_NODE_2301_length_358_cov_6.025890_g2233_i0 PRJNA450343 2301 358 6.02589 21.5726862 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 662 0   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g2233 i0 100 44.427374301676 358 0 100 0 1 358 11 368 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 15905 662 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
2989686 2989686 PRJNA450343_P_NODE_523_length_792_cov_5.444145_g476_i0 PRJNA450343 523 792 5.444145 43.1176284 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 1441 0   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g476 i0 99.495 7.16287878787879 792 4 100 0 1 792 5476 6267 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 5673 1441 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
4266079 4266079 PRJNA450343_P_NODE_4424_length_253_cov_1.250000_g4356_i0 PRJNA450343 4424 253 1.25 3.1625 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 455 1.5e-123   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g4356 i0 99.206 8.64426877470356 252 2 99 0 1 252 6958 7209 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 2187 455 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
4266085 4266085 PRJNA450343_P_NODE_5264_length_231_cov_1.686813_g5196_i0 PRJNA450343 5264 231 1.686813 3.89653803 Microplana scharffi 391273 Platyhelminthes Platyhelminthes 150 7.109999999999999e-32   NTclustered gi|2724174755|gb|PP729467.1| 391273 g5196 i0 85.816 5.3030303030303 141 20 61 0 90 230 10 150 Microplana scharffi voucher MNHN JL471 translation elongation factor 1-alpha (EF1) gene, complete cds blastn 1225 150 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Geoplanidae Microplana Microplana scharffi
4266087 4266087 PRJNA450343_P_NODE_544_length_772_cov_2.582296_g497_i0 PRJNA450343 544 772 2.582296 19.93532512 Planocera reticulata 6168 Platyhelminthes Platyhelminthes 361 1.13e-94   NTclustered gi|1782648238|dbj|LC503531.1| 6168 g497 i0 75.722 4.69170984455959 762 161 97 20 19 766 5440 6191 Planocera reticulata mitochondrial DNA, nearly complete genome blastn 3622 361 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera reticulata
4266095 4266095 PRJNA450343_P_NODE_664_length_700_cov_2.382488_g610_i0 PRJNA450343 664 700 2.382488 16.677416 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 1266 0   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g610 i0 99.286 19.3314285714286 700 5 100 0 1 700 11365 12064 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 13532 1266 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
4920667 4920667 PRJNA450343_P_NODE_1664_length_427_cov_66.325397_g1596_i0 PRJNA450343 1664 427 66.325397 283.20944519 Polycladida 6163 Platyhelminthes Platyhelminthes 789 0   NTclustered gi|28273265|gb|AY157153.1| 82852 g1596 i0 100 100.229508196721 427 0 100 0 1 427 3078 2652 Notoplana australis 28S large subunit ribosomal RNA gene, partial sequence blastn 42798 789 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Notoplanidae Notoplana Notoplana australis
6195545 6195545 PRJNA450343_P_NODE_13765_length_161_cov_0.910714_g13697_i0 PRJNA450343 13765 161 0.910714 1.46624954 Polycladida 6163 Platyhelminthes Platyhelminthes 65.8 1.72e-6   NTclustered gi|1841753|gb|U83575.1|SZU83575 46768 g13697 i0 100 0.869565217391304 35 0 22 0 127 161 51 17 Stylochus zebra spliced leader RNA gene, complete sequence blastn 140 65.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Stylochidae Stylochus Stylochus zebra
8092225 8092225 PRJNA450343_P_NODE_14207_length_155_cov_2.396226_g14139_i0 PRJNA450343 14207 155 2.396226 3.7141503 Hoploplana elisabelloi 1714492 Platyhelminthes Platyhelminthes 165 1.57e-36   NTclustered gi|944542428|ref|NC_028200.1| 1714492 g14139 i0 89.844 1.03225806451613 128 13 83 0 15 142 131 4 Hoploplana elisabelloi (nomen nudum) mitochondrion, complete genome blastn 160 165 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Hoploplanidae Hoploplana Hoploplana elisabelloi
8092261 8092261 PRJNA450343_P_NODE_667_length_699_cov_10.092308_g613_i0 PRJNA450343 667 699 10.092308 70.54523292 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 1273 0   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g613 i0 99.57 4.95135908440629 698 3 99 0 2 699 15563 14866 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 3461 1273 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
10642941 10642941 PRJNA450343_P_NODE_5909_length_220_cov_1.099415_g5841_i0 PRJNA450343 5909 220 1.099415 2.418713 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 390 3.629999999999999e-104   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g5841 i0 99.078 1.98636363636364 217 2 99 0 1 217 10297 10513 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 437 390 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
11295634 11295634 PRJNA450343_P_NODE_309_length_1009_cov_19.690625_g271_i0 PRJNA450343 309 1009 19.690625 198.67840625 Planocera 6167 Platyhelminthes Platyhelminthes 623 1.73e-173   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g271 i0 85.323 49.5391476709613 620 71 60 17 395 1004 2100 2709 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 49985 623 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
11917797 11917797 PRJNA450343_P_NODE_3430_length_289_cov_1.275000_g3362_i0 PRJNA450343 3430 289 1.275 3.68475 Planocera reticulata 6168 Platyhelminthes Platyhelminthes 534 2.18e-147   NTclustered gi|1782648238|dbj|LC503531.1| 6168 g3362 i0 100 7.98961937716263 289 0 100 0 1 289 14983 14695 Planocera reticulata mitochondrial DNA, nearly complete genome blastn 2309 534 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera reticulata
12571396 12571396 PRJNA450343_P_NODE_2130_length_374_cov_38.726154_g2062_i0 PRJNA450343 2130 374 38.726154 144.83581596 Polycladida 6163 Platyhelminthes Platyhelminthes 652 0   NTclustered gi|1735571208|gb|MN421937.1| 107733 g2062 i0 99.174 91.7245989304813 363 2 97 1 11 372 1 363 Leptoplana tremellaris isolate Egger et al. 2015 small subunit ribosomal RNA gene, partial sequence blastn 34305 654 0.996941896024465 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Leptoplanidae Leptoplana Leptoplana tremellaris
13192611 13192611 PRJNA450343_P_NODE_2311_length_357_cov_3.016234_g2243_i0 PRJNA450343 2311 357 3.016234 10.76795538 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 643 4.379999999999998e-180   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g2243 i0 99.16 2.97759103641457 357 3 100 0 1 357 9366 9010 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 1063 643 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
13192630 13192630 PRJNA450343_P_NODE_4371_length_254_cov_1.736585_g4303_i0 PRJNA450343 4371 254 1.736585 4.4109259 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 468 1.93e-127   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g4303 i0 100 7.83464566929134 253 0 99 0 1 253 3691 3943 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 1990 468 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
13192633 13192633 PRJNA450343_P_NODE_4711_length_244_cov_1.394872_g4643_i0 PRJNA450343 4711 244 1.394872 3.40348768 Opisthorchis viverrini 6198 Platyhelminthes Platyhelminthes 95.3 3.61e-15   NTclustered gi|684394421|ref|XM_009172631.1| 6198 g4643 i0 92.424 11.6024590163934 66 5 27 0 1 66 1374 1439 Opisthorchis viverrini hypothetical protein partial mRNA blastn 2831 95.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
14467687 14467687 PRJNA450343_P_NODE_2432_length_348_cov_1.598662_g2364_i0 PRJNA450343 2432 348 1.598662 5.56334376 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 638 1.99e-178   NTclustered gi|1863067187|dbj|LC516525.1| 31247 g2364 i0 99.713 45.0833333333333 348 1 100 0 1 348 435 88 Planocera multitentaculata Pmalpha01 mitochondrial COI gene for cytochrome c oxidase subunit I, partial cds blastn 15689 638 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
14467699 14467699 PRJNA450343_P_NODE_4912_length_239_cov_1.763158_g4844_i0 PRJNA450343 4912 239 1.763158 4.21394762 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 424 3.95e-114   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g4844 i0 98.739 2.91213389121339 238 3 99 0 2 239 11100 11337 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 696 424 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
18290733 18290733 PRJNA450343_P_NODE_775_length_643_cov_4.971380_g715_i0 PRJNA450343 775 643 4.97138 31.9659734 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 1140 0   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g715 i0 98.903 17.3017107309487 638 7 99 0 1 638 12271 12908 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 11125 1140 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
19564849 19564849 PRJNA450343_P_NODE_296_length_1025_cov_44.973361_g259_i0 PRJNA450343 296 1025 44.973361 460.97695025 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 1879 0   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g259 i0 99.902 51.0721951219512 1020 1 99 0 1 1020 1690 2709 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 52349 1879 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
20840681 20840681 PRJNA450343_P_NODE_437_length_859_cov_4.314815_g393_i0 PRJNA450343 437 859 4.314815 37.06426085 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 1565 0   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g393 i0 99.534 41.7392316647264 859 4 100 0 1 859 708 1566 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 35854 1565 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
20840709 20840709 PRJNA450343_P_NODE_8297_length_188_cov_1.467626_g8229_i0 PRJNA450343 8297 188 1.467626 2.75913688 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 339 1.1e-88   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g8229 i0 100 9.74468085106383 183 0 97 0 6 188 14505 14687 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 1832 339 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
23391292 23391292 PRJNA450343_P_NODE_5519_length_226_cov_1.937853_g5451_i0 PRJNA450343 5519 226 1.937853 4.37954778 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 418 1.7199999999999998e-112   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g5451 i0 100 8.84513274336283 226 0 100 0 1 226 14212 14437 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 1999 418 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata
23391299 23391299 PRJNA450343_P_NODE_719_length_672_cov_8.019262_g613_i1 PRJNA450343 719 672 8.019262 53.88944064 Planocera multitentaculata 31247 Platyhelminthes Platyhelminthes 1125 0   NTclustered gi|1782648251|dbj|LC503532.1| 31247 g613 i1 96.875 12.4508928571429 672 21 100 0 1 672 15537 14866 Planocera multitentaculata mitochondrial DNA, nearly complete genome blastn 8367 1125 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Planoceridae Planocera Planocera multitentaculata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;