RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA450343" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA450343 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1092509 1092509 PRJNA450343_P_NODE_1621_length_434_cov_13.740260_g1553_i0 PRJNA450343 1621 434 13.74026 59.6327284 Metazoa 33208 Echinodermata other_Eukaryota 396 1.68e-105   NTclustered gi|2038000226|ref|XM_041613234.1| 7654 g1553 i0 84.406 69.168202764977 404 61 93 2 1 403 501 99 PREDICTED: Lytechinus variegatus ubiquitin-40S ribosomal protein S27a (LOC121418982), mRNA blastn 30019 399 0.992481203007519 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
6816783 6816783 PRJNA450343_P_NODE_12766_length_163_cov_0.894737_g12698_i0 PRJNA450343 12766 163 0.894737 1.45842131 Diadema antillarum 105358 Echinodermata other_Eukaryota 139 1.01e-28   NTclustered gi|2919374413|ref|XM_071625007.1| 105358 g12698 i0 82.39 77.601226993865 159 28 98 0 1 159 2005 1847 PREDICTED: Diadema antillarum urease subunit alpha-like (LOC139713260), mRNA blastn 12649 139 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
13192663 13192663 PRJNA450343_P_NODE_891_length_601_cov_1.681159_g827_i0 PRJNA450343 891 601 1.681159 10.10376559 Diadema antillarum 105358 Echinodermata other_Eukaryota 84.2 2.11e-11   NTclustered gi|2919464631|ref|XM_071643143.1| 105358 g827 i0 96.078 0.479201331114809 51 2 8 0 1 51 383 433 PREDICTED: Diadema antillarum gamma-aminobutyric acid receptor-associated protein (LOC139732270), mRNA blastn 288 84.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
23391312 23391312 PRJNA450343_P_NODE_8479_length_186_cov_3.700730_g8411_i0 PRJNA450343 8479 186 3.70073 6.8833578 Anneissia japonica 1529436 Echinodermata other_Eukaryota 135 1.53e-27   NTclustered gi|1826636548|ref|XM_033259799.1| 1529436 g8411 i0 85.827 1.84408602150538 127 18 68 0 60 186 240 366 PREDICTED: Anneissia japonica serine/threonine-protein phosphatase 4 catalytic subunit (LOC117115853), mRNA blastn 343 135 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;