RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA450343" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA450343 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18290707 18290707 PRJNA450343_P_NODE_335_length_974_cov_2.859459_g296_i0 PRJNA450343 335 974 2.859459 27.85113066 Spirobranchus giganteus 1914524 Annelida Annelida 368 8.62e-97   NTclustered gi|1111669900|ref|NC_032055.1| 1914524 g296 i0 78.392 6.30082135523614 597 107 60 16 367 947 12212 12802 Spirobranchus giganteus mitochondrion, complete genome blastn 6137 368 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Serpulidae Spirobranchus Spirobranchus giganteus
23391269 23391269 PRJNA450343_P_NODE_1599_length_438_cov_0.897172_g1531_i0 PRJNA450343 1599 438 0.897172 3.92961336 Platynereis dumerilii 6359 Annelida Annelida 289 2.96e-73   NTclustered gi|83306593|emb|CT032567.1| 6359 g1531 i0 78.767 92.4520547945205 438 87 99 5 1 435 85 519 Platynereis dumerilii EST IB0AAA36BC12FM1 blastn 40494 289 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;