RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA448207" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA448207 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8092096 8092096 PRJNA448207_P_NODE_6127_length_488_cov_1.903614_g5965_i0 PRJNA448207 6127 488 1.903614 9.28963632 Lobosporangium transversale 64571 Fungi Fungi 60.2 2.84e-4   NTclustered gi|1227136130|ref|XM_022023699.1| 64571 g5965 i0 100 6.70491803278689 32 0 7 0 407 438 320 289 Lobosporangium transversale hypothetical protein (BCR41DRAFT_350907), mRNA blastn 3272 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
11917261 11917261 PRJNA448207_P_NODE_13230_length_346_cov_1.560440_g13067_i0 PRJNA448207 13230 346 1.56044 5.3991224 Lichtheimia ornata 688661 Fungi Fungi 56.5 0.003   NTclustered gi|2553573551|ref|XM_058485423.1| 688661 g13067 i0 94.595 2.32947976878613 37 0 10 2 181 215 82 118 Lichtheimia ornata uncharacterized protein (O0I10_005378), partial mRNA blastn 806 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
23391227 23391227 PRJNA448207_S_NODE_3799_length_244_cov_1.561404_g3788_i0 PRJNA448207 3799 244 1.561404 3.80982576 Lobosporangium transversale 64571 Fungi Fungi 60.2 1.32e-4   NTclustered gi|1227136130|ref|XM_022023699.1| 64571 g3788 i0 100 13.4098360655738 32 0 13 0 169 200 289 320 Lobosporangium transversale hypothetical protein (BCR41DRAFT_350907), mRNA blastn 3272 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;