RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA448207" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA448207 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6816608 6816608 PRJNA448207_P_NODE_32706_length_242_cov_0.911243_g32543_i0 PRJNA448207 32706 242 0.911243 2.20520806 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 392 1.1299999999999999e-104   NTclustered gi|2522768008|gb|OR162445.1| 646526 g32543 i0 96.25 45.5165289256198 240 7 99 2 1 239 3268 3506 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11015 392 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
13192045 13192045 PRJNA448207_P_NODE_10451_length_383_cov_1.490323_g10289_i0 PRJNA448207 10451 383 1.490323 5.70793709 Vavraia culicis 103449 Fungi Fungi 270 9.27e-68   NTclustered gi|667631888|ref|XM_008075036.1| 948595 g10289 i0 79.373 5.3733681462141 383 79 100 0 1 383 194 576 Vavraia culicis subsp. floridensis actin-1 (VCUG_00207), mRNA blastn 2058 270 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
20840463 20840463 PRJNA448207_P_NODE_30577_length_244_cov_1.210526_g30414_i0 PRJNA448207 30577 244 1.210526 2.95368344 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 279 9.27e-71   NTclustered gi|2522768008|gb|OR162445.1| 646526 g30414 i0 87.347 5.29918032786885 245 29 100 2 1 244 1986 2229 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1293 279 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;