RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA448207" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA448207 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1092484 1092484 PRJNA448207_P_NODE_921_length_1103_cov_2.936893_g836_i0 PRJNA448207 921 1103 2.936893 32.39392979 root 1 Root_unresolved Root_unresolved 1718 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g836 i0 99.893 99.2710788757933 934 0 99 1 1 934 16856 17788 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 109496 1718 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
13845736 13845736 PRJNA448207_P_NODE_18091_length_302_cov_1.344978_g17928_i0 PRJNA448207 18091 302 1.344978 4.06183356 root 1 Root_unresolved Root_unresolved 547 2.9399999999999987e-151   NTclustered gi|2620236085|gb|OR777220.1| 10515 g17928 i0 99.338 100 302 2 100 0 1 302 14811 15112 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 30200 547 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
18943784 18943784 PRJNA448207_P_NODE_2635_length_725_cov_2.763804_g2492_i0 PRJNA448207 2635 725 2.763804 20.037579 root 1 Root_unresolved Root_unresolved 918 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g2492 i0 98.837 95.6937931034483 516 4 93 2 1 516 15665 16178 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 69378 918 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;