RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA448207" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA448207 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2989622 2989622 PRJNA448207_S_NODE_1663_length_339_cov_1.105263_g1652_i0 PRJNA448207 1663 339 1.105263 3.74684157 haloarchaeon 3A1-DGR 1071085 Archaea Archaea 56.5 0.002   NTclustered gi|1804090075|gb|CP048032.1| 1071085 g1652 i0 100 0.345132743362832 30 0 9 0 59 88 1418784 1418813 Haloarchaeon 3A1-DGR strain 3A1-DGR chromosome, complete genome blastn 117 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     haloarchaeon 3A1-DGR
9366717 9366717 PRJNA448207_P_NODE_2788_length_707_cov_4.272871_g2641_i0 PRJNA448207 2788 707 4.272871 30.20919797 haloarchaeon 3A1-DGR 1071085 Archaea Archaea 56.5 0.005   NTclustered gi|1804090075|gb|CP048032.1| 1071085 g2641 i0 100 0.165487977369165 30 0 4 0 216 245 1418784 1418813 Haloarchaeon 3A1-DGR strain 3A1-DGR chromosome, complete genome blastn 117 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     haloarchaeon 3A1-DGR

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;