RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA446034" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA446034 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8745004 8745004 PRJNA446034_S_NODE_65107_length_172_cov_4.903704_g65070_i0 PRJNA446034 65107 172 4.903704 8.43437088 Pocilloporidae 46729 Cnidaria other_Eukaryota 52.8 0.014   NTclustered gi|1270030810|ref|XM_022937432.1| 50429 g65070 i0 100 0.348837209302326 28 0 16 0 47 74 1722 1695 PREDICTED: Stylophora pistillata coiled-coil domain-containing protein 39-like (LOC111332143), mRNA blastn 60 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
14466677 14466677 PRJNA446034_S_NODE_101192_length_155_cov_1.644068_g101155_i0 PRJNA446034 101192 155 1.644068 2.5483054 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 99 1.61e-16   NTclustered gi|2518994030|ref|XM_057448216.1| 13093 g101155 i0 91.549 1.09677419354839 71 6 46 0 83 153 536 466 PREDICTED: Hydractinia symbiolongicarpus cdc42 homolog (LOC130641417), mRNA blastn 170 99 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
14466851 14466851 PRJNA446034_S_NODE_3492_length_333_cov_3.814189_g3455_i0 PRJNA446034 3492 333 3.814189 12.70124937 Bivalvulida gen. n. sp. a JO-2023 3073449 Cnidaria other_Eukaryota 213 1.36e-50   NTclustered gi|2572825558|gb|OR509833.1| 3073449 g3455 i0 86.5 50.042042042042 200 19 60 6 124 322 615 423 Bivalvulida gen. n. sp. a JO-2023 isolate BM_02 large subunit ribosomal RNA gene, partial sequence blastn 16664 213 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida     Bivalvulida gen. n. sp. a JO-2023
17015724 17015724 PRJNA446034_S_NODE_85874_length_161_cov_3.040323_g85837_i0 PRJNA446034 85874 161 3.040323 4.89492003 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 252 1.23e-62   NTclustered gi|681870004|gb|KM001687.1| 1542451 g85837 i0 100 4.22360248447205 136 0 84 0 1 136 877 1012 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 680 252 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;