RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA446034" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA446034 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
438455 438455 PRJNA446034_S_NODE_96481_length_156_cov_28.336134_g96444_i0 PRJNA446034 96481 156 28.336134 44.20436904 Ralstonia phage 1 NP-2014 1460070 Viruses Viruses 224 2.57e-54   NTclustered gi|589287117|ref|NC_023586.1| 1460070 g96444 i0 92.405 5.19871794871795 158 10 100 2 1 156 4189 4346 Ralstonia phage 1 NP-2014, complete sequence blastn 811 224 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Ralstonia phage 1 NP-2014
23390431 23390431 PRJNA446034_S_NODE_4819_length_310_cov_2.300366_g4782_i0 PRJNA446034 4819 310 2.300366 7.1311346 Inoviridae sp. 2219103 Viruses Viruses 405 1.93e-108   NTclustered gi|2059847790|tpg|BK040447.1| 2219103 g4782 i0 90.584 5.9258064516129 308 26 99 1 2 309 7807 7503 MAG TPA_asm: Inoviridae sp. isolate cts3P6, partial genome blastn 1837 405 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
23390620 23390620 PRJNA446034_S_NODE_86259_length_161_cov_2.177419_g86222_i0 PRJNA446034 86259 161 2.177419 3.50564459 Inoviridae sp. 2219103 Viruses Viruses 285 1.2099999999999998e-72   NTclustered gi|2056936201|tpg|BK022393.1| 2219103 g86222 i0 98.75 99.3788819875776 160 2 99 0 1 160 2522 2681 MAG TPA_asm: Inoviridae sp. isolate ct6Da14, partial genome blastn 16000 285 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;