RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA446034" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA446034 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
438371 438371 PRJNA446034_S_NODE_76601_length_166_cov_1.186047_g76564_i0 PRJNA446034 76601 166 1.186047 1.96883802 Erythrocytic necrosis virus 1543320 Viruses Viruses 252 1.28e-62   NTclustered gi|1624806707|gb|MK638720.1| 1543320 g76564 i0 95.541 25.355421686747 157 7 95 0 10 166 271 115 Erythrocytic necrosis virus isolate SEQ_18 putative RNA-dependent DNA polymerase mRNA, partial cds blastn 4209 252 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
6194969 6194969 PRJNA446034_S_NODE_31525_length_204_cov_3.580838_g31488_i0 PRJNA446034 31525 204 3.580838 7.30490952 root 1 Root_unresolved Root_unresolved 377 2.59e-100   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g31488 i0 100 100 204 0 100 0 1 204 34590 34387 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 20400 377 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;