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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA438687" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA438687 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1710116 1710116 PRJNA438687_S_NODE_1682_length_323_cov_4.579861_g1592_i0 PRJNA438687 1682 323 4.579861 14.79295103 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 490 5.42e-134   NTclustered gi|837350690|gb|CP011211.1| 1619070 g1592 i0 94.118 73.1114551083591 323 18 100 1 1 323 851449 851128 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 23615 490 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
3642218 3642218 PRJNA438687_S_NODE_7643_length_156_cov_8.140496_g7553_i0 PRJNA438687 7643 156 8.140496 12.69917376 Bacteria 2 Bacteria Bacteria 248 1.5299999999999998e-61   NTclustered gi|2874254068|emb|OY970151.1| 179883 g7553 i0 95.484 14.6858974358974 155 7 99 0 2 156 657858 658012 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD00082.bin.2.65 genome assembly, chromosome: 1 blastn 2291 248 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
13844715 13844715 PRJNA438687_S_NODE_2991_length_258_cov_17.322870_g2901_i0 PRJNA438687 2991 258 17.32287 44.6930046 Bacteria 2 Bacteria Bacteria 446 9.22e-121   NTclustered gi|837350690|gb|CP011211.1| 1619070 g2901 i0 98.419 194.813953488372 253 4 98 0 6 258 852278 852026 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 50262 446 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
15738035 15738035 PRJNA438687_S_NODE_7173_length_162_cov_2.976378_g7083_i0 PRJNA438687 7173 162 2.976378 4.82173236 Candidatus Saccharibacteria bacterium oral taxon 488 713059 Bacteria Bacteria 244 2.07e-60   NTclustered gi|1842055115|gb|CP040000.1| 713059 g7083 i0 95.455 65.2345679012346 154 6 94 1 10 162 147520 147367 Candidatus Saccharibacteria bacterium oral taxon 488 strain FS03P chromosome, complete genome blastn 10568 244 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
17668831 17668831 PRJNA438687_S_NODE_1254_length_352_cov_5.668770_g1164_i0 PRJNA438687 1254 352 5.66877 19.9540704 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 540 5.82e-149   NTclustered gi|1842065531|gb|CP040002.1| 713059 g1164 i0 95.072 95.1619318181818 345 13 98 2 5 349 152482 152142 Candidatus Saccharibacteria bacterium oral taxon 488 strain AC002 chromosome, complete genome blastn 33497 540 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
18287003 18287003 PRJNA438687_S_NODE_6055_length_178_cov_3.104895_g5965_i0 PRJNA438687 6055 178 3.104895 5.5267131 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 255 1.07e-63   NTclustered gi|2874254068|emb|OY970151.1| 179883 g5965 i0 93.143 131.97191011236 175 11 98 1 1 175 656228 656401 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD00082.bin.2.65 genome assembly, chromosome: 1 blastn 23491 255 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
19561225 19561225 PRJNA438687_S_NODE_4256_length_215_cov_3.127778_g4166_i0 PRJNA438687 4256 215 3.127778 6.7247227 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 361 2.7699999999999993e-95   NTclustered gi|2874254068|emb|OY970151.1| 179883 g4166 i0 97.183 144.046511627907 213 6 99 0 3 215 658799 659011 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD00082.bin.2.65 genome assembly, chromosome: 1 blastn 30970 361 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;