contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA438687" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1710231 | 1710231 | PRJNA438687_S_NODE_6722_length_168_cov_3.917293_g6632_i0 | PRJNA438687 | 6722 | 168 | 3.917293 | 6.58105224 | Fusobacteria bacterium ZRK30 | 2970471 | Bacteria | Bacteria | 233 | 4.7e-57 | NTclustered | gi|2284594148|gb|CP102404.1| | 2970471 | g6632 | i0 | 91.667 | 233.904761904762 | 168 | 14 | 100 | 0 | 1 | 168 | 205720 | 205553 | Fusobacteria bacterium ZRK30 chromosome 1, complete sequence | blastn | 39296 | 233 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteria bacterium ZRK30 | ||||||
| 2366617 | 2366617 | PRJNA438687_S_NODE_3762_length_229_cov_22.283505_g3672_i0 | PRJNA438687 | 3762 | 229 | 22.283505 | 51.02922645 | Fusobacterium | 848 | Bacteria | Bacteria | 424 | 3.76e-114 | NTclustered | gi|2573686249|gb|CP133474.1| | 851 | g3672 | i0 | 100 | 481.786026200873 | 229 | 0 | 100 | 0 | 1 | 229 | 322039 | 322267 | Fusobacterium nucleatum strain LMG 13131 chromosome, complete genome | blastn | 110329 | 424 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 4919385 | 4919385 | PRJNA438687_S_NODE_6904_length_165_cov_419.776923_g6814_i0 | PRJNA438687 | 6904 | 165 | 419.776923 | 692.63192295 | Fusobacterium | 848 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g6814 | i0 | 100 | 496 | 165 | 0 | 100 | 0 | 1 | 165 | 93737 | 93573 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 81840 | 305 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 5538969 | 5538969 | PRJNA438687_S_NODE_265_length_558_cov_24.688337_g193_i0 | PRJNA438687 | 265 | 558 | 24.688337 | 137.76092046 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 1031 | 0 | NTclustered | gi|1276720946|gb|CP024705.1| | 2663009 | g193 | i0 | 100 | 477.530465949821 | 558 | 0 | 100 | 0 | 1 | 558 | 1620664 | 1620107 | Fusobacterium pseudoperiodonticum strain KCOM 2653 chromosome, complete genome | blastn | 266462 | 1031 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 5539086 | 5539086 | PRJNA438687_S_NODE_8065_length_152_cov_1.333333_g7975_i0 | PRJNA438687 | 8065 | 152 | 1.333333 | 2.02666616 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 191 | 2.52e-44 | NTclustered | gi|2706424020|gb|CP077136.1| | 76857 | g7975 | i0 | 90.845 | 29.1907894736842 | 142 | 13 | 93 | 0 | 11 | 152 | 286031 | 285890 | Fusobacterium polymorphum strain KCOM3036 chromosome, complete genome | blastn | 4437 | 191 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 7469238 | 7469238 | PRJNA438687_S_NODE_86_length_692_cov_23.754947_g6_i2 | PRJNA438687 | 86 | 692 | 23.754947 | 164.38423324 | Fusobacterium | 848 | Bacteria | Bacteria | 1262 | 0 | NTclustered | gi|2444100754|gb|CP117525.1| | 851 | g6 | i2 | 99.566 | 481.420520231214 | 692 | 3 | 100 | 0 | 1 | 692 | 84132 | 84823 | Fusobacterium nucleatum strain FNV chromosome, complete genome | blastn | 333143 | 1267 | 0.996053670086819 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 8744233 | 8744233 | PRJNA438687_S_NODE_7487_length_158_cov_2.552846_g7397_i0 | PRJNA438687 | 7487 | 158 | 2.552846 | 4.03349668 | Cetobacterium | 180162 | Bacteria | Bacteria | 231 | 1.5599999999999998e-56 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g7397 | i0 | 93.038 | 221.73417721519 | 158 | 11 | 100 | 0 | 1 | 158 | 277934 | 278091 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 35034 | 231 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 9363367 | 9363367 | PRJNA438687_S_NODE_6128_length_177_cov_3.000000_g6038_i0 | PRJNA438687 | 6128 | 177 | 3 | 5.31 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 292 | 8.09e-75 | NTclustered | gi|2865366169|gb|CP122292.1| | 188913 | g6038 | i0 | 96.61 | 57 | 177 | 5 | 100 | 1 | 1 | 177 | 420197 | 420372 | Cetobacterium somerae strain MSU41 chromosome, complete genome | blastn | 10089 | 292 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 11294296 | 11294296 | PRJNA438687_S_NODE_29_length_989_cov_20.906709_g6_i1 | PRJNA438687 | 29 | 989 | 20.906709 | 206.76735201 | Cetobacterium | 180162 | Bacteria | Bacteria | 1570 | 0 | NTclustered | gi|2865366169|gb|CP122292.1| | 188913 | g6 | i1 | 95.267 | 489.517694641052 | 993 | 43 | 100 | 4 | 1 | 989 | 1577052 | 1578044 | Cetobacterium somerae strain MSU41 chromosome, complete genome | blastn | 484133 | 1570 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 11294405 | 11294405 | PRJNA438687_S_NODE_89_length_689_cov_18.637615_g6_i3 | PRJNA438687 | 89 | 689 | 18.637615 | 128.41316735 | Fusobacterium | 848 | Bacteria | Bacteria | 1118 | 0 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g6 | i3 | 96.087 | 480.660377358491 | 690 | 19 | 100 | 4 | 1 | 689 | 462233 | 462915 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 331175 | 1118 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 14463974 | 14463974 | PRJNA438687_S_NODE_3412_length_241_cov_3.854369_g3322_i0 | PRJNA438687 | 3412 | 241 | 3.854369 | 9.28902929 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 390 | 4.05e-104 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g3322 | i0 | 95.868 | 415.398340248963 | 242 | 9 | 100 | 1 | 1 | 241 | 53078 | 52837 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 100111 | 390 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 19561280 | 19561280 | PRJNA438687_S_NODE_7256_length_161_cov_2.500000_g7166_i0 | PRJNA438687 | 7256 | 161 | 2.5 | 4.025 | Fusobacteriaceae bacterium | 2053555 | Bacteria | Bacteria | 171 | 3.54e-38 | NTclustered | gi|2892346784|dbj|AP035781.1| | 2053555 | g7166 | i0 | 86.25 | 337.490683229814 | 160 | 19 | 99 | 3 | 2 | 161 | 3549 | 3705 | Fusobacteriaceae bacterium 9N8 DNA, complete genome | blastn | 54336 | 171 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacteriaceae bacterium | |||
| 19561293 | 19561293 | PRJNA438687_S_NODE_8116_length_151_cov_2.318966_g8026_i0 | PRJNA438687 | 8116 | 151 | 2.318966 | 3.50163866 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 263 | 5.23e-66 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g8026 | i0 | 98.013 | 305.019867549669 | 151 | 3 | 100 | 0 | 1 | 151 | 52426 | 52276 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 46058 | 263 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 20217415 | 20217415 | PRJNA438687_S_NODE_5136_length_195_cov_17.112500_g5046_i0 | PRJNA438687 | 5136 | 195 | 17.1125 | 33.369375 | Fusobacteriaceae | 203492 | Bacteria | Bacteria | 305 | 1.17e-78 | NTclustered | gi|2705042081|gb|CP085192.1| | 856 | g5046 | i0 | 94.872 | 520 | 195 | 10 | 100 | 0 | 1 | 195 | 157853 | 158047 | Fusobacterium varium strain SB069 chromosome | blastn | 101400 | 305 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 20836924 | 20836924 | PRJNA438687_S_NODE_5997_length_179_cov_7.298611_g5907_i0 | PRJNA438687 | 5997 | 179 | 7.298611 | 13.06451369 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 318 | 1.35e-82 | NTclustered | gi|2850954511|gb|CP173065.1| | 1319815 | g5907 | i0 | 99.429 | 492.921787709497 | 175 | 1 | 99 | 0 | 1 | 175 | 941118 | 941292 | Cetobacterium somerae ATCC BAA-474 chromosome | blastn | 88233 | 318 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 22768192 | 22768192 | PRJNA438687_S_NODE_98_length_677_cov_23.654206_g6_i4 | PRJNA438687 | 98 | 677 | 23.654206 | 160.13897462 | Fusobacterium | 848 | Bacteria | Bacteria | 1044 | 0 | NTclustered | gi|15028908|emb|AJ307974.1| | 851 | g6 | i4 | 94.69 | 478.46528803545 | 678 | 26 | 100 | 6 | 1 | 677 | 528 | 1196 | Fusobacterium nucleatum 23S rRNA gene, strain DSM 20482 | blastn | 323921 | 1048 | 0.99618320610687 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;