contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA438572" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2366363 | 2366363 | PRJNA438572_P_NODE_11182_length_307_cov_2.000000_g11063_i0 | PRJNA438572 | 11182 | 307 | 2 | 6.14 | Haliangium | 162027 | Bacteria | Bacteria | 377 | 4.16e-100 | NTclustered | gi|470485361|ref|NR_076697.1| | 80816 | g11063 | i0 | 88.961 | 177.625407166124 | 308 | 31 | 99 | 3 | 1 | 306 | 1279 | 973 | Haliangium ochraceum strain SMP-2 23S ribosomal RNA gene, complete sequence | blastn | 54531 | 377 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | Haliangium ochraceum | |||
| 3641953 | 3641953 | PRJNA438572_P_NODE_1683_length_740_cov_1.272864_g1579_i0 | PRJNA438572 | 1683 | 740 | 1.272864 | 9.4191936 | Stigmatella | 40 | Bacteria | Bacteria | 981 | 0 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g1579 | i0 | 90.701 | 242.933783783784 | 742 | 61 | 100 | 5 | 1 | 740 | 917 | 182 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 179771 | 981 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 6812843 | 6812843 | PRJNA438572_P_NODE_24126_length_242_cov_0.923077_g24007_i0 | PRJNA438572 | 24126 | 242 | 0.923077 | 2.23384634 | Minicystis rosea | 888845 | Bacteria | Bacteria | 185 | 2.06e-42 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g24007 | i0 | 81.092 | 70.8512396694215 | 238 | 39 | 97 | 6 | 1 | 235 | 10105655 | 10105889 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 17146 | 185 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 17012295 | 17012295 | PRJNA438572_P_NODE_17194_length_253_cov_0.866667_g17075_i0 | PRJNA438572 | 17194 | 253 | 0.866667 | 2.19266751 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 254 | 5.86e-63 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g17075 | i0 | 85.156 | 3.04347826086957 | 256 | 28 | 99 | 9 | 3 | 253 | 8660101 | 8660351 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 770 | 254 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 25317292 | 25317292 | PRJNA438572_P_NODE_7540_length_369_cov_1.050676_g7421_i0 | PRJNA438572 | 7540 | 369 | 1.050676 | 3.87699444 | Haliangium | 162027 | Bacteria | Bacteria | 420 | 8.34e-113 | NTclustered | gi|470485361|ref|NR_076697.1| | 80816 | g7421 | i0 | 88.122 | 239.691056910569 | 362 | 32 | 98 | 7 | 8 | 369 | 1523 | 1173 | Haliangium ochraceum strain SMP-2 23S ribosomal RNA gene, complete sequence | blastn | 88446 | 420 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | Haliangium ochraceum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;