RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA438572" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA438572 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18286482 18286482 PRJNA438572_P_NODE_10135_length_322_cov_1.409639_g10016_i0 PRJNA438572 10135 322 1.409639 4.53903758 Ailoscolex lacteospumosus 1046305 Annelida Annelida 156 2.24e-33   NTclustered gi|2920003644|emb|OZ238875.1| 1046305 g10016 i0 79.399 0.72360248447205 233 39 70 5 5 229 6746266 6746035 Ailoscolex lacteospumosus genome assembly, chromosome: 16 blastn 233 156 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
18286783 18286783 PRJNA438572_P_NODE_4655_length_457_cov_3.908854_g4536_i0 PRJNA438572 4655 457 3.908854 17.86346278 Arenicola marina 6344 Annelida Annelida 291 8.63e-74   NTclustered gi|158187723|gb|EU124946.1| 6344 g4536 i0 82.727 72.328227571116 330 53 72 4 3 330 446 119 Arenicola marina ribosomal protein rps23 mRNA, complete cds blastn 33054 291 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Arenicolidae Arenicola Arenicola marina
22111825 22111825 PRJNA438572_P_NODE_7758_length_364_cov_2.037801_g7639_i0 PRJNA438572 7758 364 2.037801 7.41759564 Hirudo verbana 311461 Annelida Annelida 52.8 0.035   NTclustered gi|2918369714|emb|OZ237790.1| 311461 g7639 i0 100 0.0769230769230769 28 0 8 0 306 333 6771104 6771077 Hirudo verbana genome assembly, chromosome: 12 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
24661314 24661314 PRJNA438572_P_NODE_23280_length_243_cov_1.747059_g23161_i0 PRJNA438572 23280 243 1.747059 4.24535337 Ailoscolex lacteospumosus 1046305 Annelida Annelida 56.5 0.002   NTclustered gi|2920003563|emb|OZ238869.1| 1046305 g23161 i0 97.059 0.139917695473251 34 0 14 1 197 229 20938972 20938939 Ailoscolex lacteospumosus genome assembly, chromosome: 10 blastn 34 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;