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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA438111" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA438111 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1709126 1709126 PRJNA438111_P_NODE_46822_length_185_cov_3.634615_g46197_i0 PRJNA438111 46822 185 3.634615 6.72403775 uncultured crenarchaeote 57a5 684058 Archaea Archaea 217 5.29e-52   NTclustered gi|262089272|gb|GU059107.1| 684058 g46197 i0 85.864 1.03243243243243 191 21 100 2 1 185 34401 34211 Uncultured crenarchaeote 57a5 genomic sequence blastn 191 217 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote 57a5
8087717 8087717 PRJNA438111_P_NODE_65667_length_167_cov_3.811594_g65042_i0 PRJNA438111 65667 167 3.811594 6.36536198 uncultured crenarchaeote 57a5 684058 Archaea Archaea 220 3.63e-53   NTclustered gi|262089272|gb|GU059107.1| 684058 g65042 i0 90.419 1 167 16 100 0 1 167 18362 18528 Uncultured crenarchaeote 57a5 genomic sequence blastn 167 220 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote 57a5
10638462 10638462 PRJNA438111_P_NODE_70649_length_164_cov_2.103704_g70024_i0 PRJNA438111 70649 164 2.103704 3.45007456 uncultured crenarchaeote 57a5 684058 Archaea Archaea 298 1.59e-76   NTclustered gi|262089272|gb|GU059107.1| 684058 g70024 i0 99.39 1 164 1 100 0 1 164 12346 12183 Uncultured crenarchaeote 57a5 genomic sequence blastn 164 298 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote 57a5
14463129 14463129 PRJNA438111_P_NODE_60092_length_171_cov_3.507042_g59467_i0 PRJNA438111 60092 171 3.507042 5.99704182 uncultured crenarchaeote 57a5 684058 Archaea Archaea 272 1.01e-68   NTclustered gi|262089272|gb|GU059107.1| 684058 g59467 i0 95.322 1 171 8 100 0 1 171 22530 22700 Uncultured crenarchaeote 57a5 genomic sequence blastn 171 272 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote 57a5
14463488 14463488 PRJNA438111_P_NODE_87132_length_152_cov_5.081301_g86507_i0 PRJNA438111 87132 152 5.081301 7.72357752 uncultured crenarchaeote 29d5 684057 Archaea Archaea 124 2.5999999999999996e-24   NTclustered gi|262089226|gb|GU059106.1| 684057 g86507 i0 89 0.657894736842105 100 11 66 0 1 100 1109 1208 Uncultured crenarchaeote 29d5 genomic sequence blastn 100 124 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote 29d5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;