RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA438111" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA438111 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11912777 11912777 PRJNA438111_P_NODE_30570_length_210_cov_4.077348_g29945_i0 PRJNA438111 30570 210 4.077348 8.5624308 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 174 3.77e-39   NTclustered gi|937513727|gb|CP012850.1| 1353260 g29945 i0 98 0.947619047619048 100 2 95 0 1 100 576248 576347 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 199 174 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
13844413 13844413 PRJNA438111_P_NODE_85551_length_153_cov_8.016129_g84926_i0 PRJNA438111 85551 153 8.016129 12.26467737 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 115 1.58e-21   NTclustered gi|937513727|gb|CP012850.1| 1353260 g84926 i0 97.059 24.2352941176471 68 2 44 0 86 153 2445083 2445150 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 3708 115 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
18286225 18286225 PRJNA438111_P_NODE_73155_length_162_cov_4.060150_g72530_i0 PRJNA438111 73155 162 4.06015 6.577443 Candidatus Nitrososphaera evergladensis 1459637 Archaea Archaea 163 5.97e-36   NTclustered gi|665992324|gb|CP007174.1| 1459636 g72530 i0 85.806 0.95679012345679 155 21 95 1 9 162 470419 470265 Candidatus Nitrososphaera evergladensis SR1, complete genome blastn 155 163 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera evergladensis
24660911 24660911 PRJNA438111_P_NODE_76100_length_161_cov_1.075758_g75475_i0 PRJNA438111 76100 161 1.075758 1.73197038 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 265 1.5799999999999998e-66   NTclustered gi|937513727|gb|CP012850.1| 1353260 g75475 i0 96.273 1 161 6 100 0 1 161 578233 578073 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 161 265 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;