contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA438111" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 433965 | 433965 | PRJNA438111_P_NODE_28521_length_210_cov_5.408840_g27896_i0 | PRJNA438111 | 28521 | 210 | 5.40884 | 11.358564 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 102 | 1.8e-17 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g27896 | i0 | 85.859 | 2.75714285714286 | 99 | 10 | 46 | 4 | 4 | 100 | 4885809 | 4885713 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 579 | 102 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 2985264 | 2985264 | PRJNA438111_P_NODE_70743_length_164_cov_1.970370_g70118_i0 | PRJNA438111 | 70743 | 164 | 1.97037 | 3.2314068 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 91.6 | 2.9e-14 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g70118 | i0 | 84.211 | 0.579268292682927 | 95 | 13 | 57 | 2 | 71 | 164 | 1020166 | 1020073 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 95 | 91.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 2985423 | 2985423 | PRJNA438111_P_NODE_83543_length_155_cov_3.190476_g82918_i0 | PRJNA438111 | 83543 | 155 | 3.190476 | 4.9452378 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 185 | 1.2e-42 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g82918 | i0 | 89.655 | 0.935483870967742 | 145 | 15 | 94 | 0 | 1 | 145 | 4100892 | 4100748 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 145 | 185 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 4261720 | 4261720 | PRJNA438111_P_NODE_80204_length_157_cov_7.429688_g79579_i0 | PRJNA438111 | 80204 | 157 | 7.429688 | 11.66461016 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 108 | 2.73e-19 | NTclustered | gi|2518552101|emb|OX638356.1| | 2910168 | g79579 | i0 | 80.556 | 7.77707006369427 | 144 | 24 | 90 | 4 | 1 | 142 | 1989933 | 1989792 | MAG: Longimicrobiales bacterium isolate 11c1aa9f-90ef-4017-a54d-d6b2e11378d8 genome assembly, chromosome: 1 | blastn | 1221 | 108 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 5537692 | 5537692 | PRJNA438111_P_NODE_29085_length_210_cov_4.988950_g28460_i0 | PRJNA438111 | 29085 | 210 | 4.98895 | 10.476795 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 91.6 | 3.91e-14 | NTclustered | gi|2874254163|emb|OY970395.1| | 412054 | g28460 | i0 | 86.585 | 2.17142857142857 | 82 | 11 | 39 | 0 | 118 | 199 | 265258 | 265339 | MAG: uncultured Gemmatimonadales bacterium isolate MFD05684.bin.c.1 genome assembly, chromosome: 1 | blastn | 456 | 91.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 6812405 | 6812405 | PRJNA438111_P_NODE_76846_length_160_cov_3.251908_g76221_i0 | PRJNA438111 | 76846 | 160 | 3.251908 | 5.2030528 | Gemmatimonas phototrophica | 1379270 | Bacteria | Bacteria | 117 | 4.64e-22 | NTclustered | gi|1015602748|gb|CP011454.1| | 1379270 | g76221 | i0 | 80.625 | 6.5125 | 160 | 24 | 97 | 7 | 4 | 158 | 3754310 | 3754153 | Gemmatimonas phototrophica strain AP64, complete genome | blastn | 1042 | 117 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas phototrophica | |
| 9362048 | 9362048 | PRJNA438111_P_NODE_32148_length_210_cov_3.513812_g31523_i0 | PRJNA438111 | 32148 | 210 | 3.513812 | 7.3790052 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 80.5 | 8.45e-11 | NTclustered | gi|2621703510|emb|OY762557.1| | 2910168 | g31523 | i0 | 81 | 0.952380952380952 | 100 | 19 | 48 | 0 | 111 | 210 | 507521 | 507620 | MAG: Longimicrobiales bacterium isolate c10e2151-7d97-4465-9cf7-a78a4796a63d genome assembly, chromosome: 1 | blastn | 200 | 80.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 9362459 | 9362459 | PRJNA438111_P_NODE_62188_length_170_cov_1.007092_g61563_i0 | PRJNA438111 | 62188 | 170 | 1.007092 | 1.7120564 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 124 | 2.97e-24 | NTclustered | gi|2108325062|gb|CP070666.1| | 2026742 | g61563 | i0 | 84.677 | 0.729411764705882 | 124 | 19 | 73 | 0 | 10 | 133 | 5476958 | 5476835 | MAG: Gemmatimonadetes bacterium isolate bin75 chromosome | blastn | 124 | 124 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 17668373 | 17668373 | PRJNA438111_P_NODE_59834_length_171_cov_4.894366_g59209_i0 | PRJNA438111 | 59834 | 171 | 4.894366 | 8.36936586 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 198 | 1.7399999999999998e-46 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g59209 | i0 | 87.719 | 89.4912280701754 | 171 | 20 | 99 | 1 | 1 | 170 | 131268 | 131098 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 15303 | 200 | 0.99 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 17668454 | 17668454 | PRJNA438111_P_NODE_70134_length_164_cov_3.822222_g69509_i0 | PRJNA438111 | 70134 | 164 | 3.822222 | 6.26844408 | FCB group | 1783270 | Bacteria | Bacteria | 62.1 | 2.27e-5 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g69509 | i0 | 97.222 | 212.518292682927 | 36 | 1 | 29 | 0 | 14 | 49 | 2454027 | 2453992 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 34853 | 62.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 20835709 | 20835709 | PRJNA438111_P_NODE_33077_length_209_cov_4.722222_g32452_i0 | PRJNA438111 | 33077 | 209 | 4.722222 | 9.86944398 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 87.9 | 5.02e-13 | NTclustered | gi|2107779373|gb|CP070829.1| | 2448054 | g32452 | i0 | 86.25 | 0.382775119617225 | 80 | 11 | 38 | 0 | 128 | 207 | 2436702 | 2436781 | MAG: Gemmatimonadales bacterium isolate bin109 chromosome | blastn | 80 | 87.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 20836387 | 20836387 | PRJNA438111_P_NODE_87057_length_152_cov_5.601626_g86432_i0 | PRJNA438111 | 87057 | 152 | 5.601626 | 8.51447152 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 122 | 9.34e-24 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g86432 | i0 | 82.192 | 1.92105263157895 | 146 | 23 | 96 | 2 | 5 | 150 | 2601160 | 2601018 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 292 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;