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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA437204" and tax_superkingdom = "Archaea"

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tax_phylum 2

tax_superkingdom 1

  • Archaea · 30 ✖

tax_kingdom 1

bioproject 1

  • PRJNA437204 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1706507 1706507 PRJNA437204_P_NODE_107682_length_245_cov_0.895349_g107383_i0 PRJNA437204 107682 245 0.895349 2.19360505 methanogenic archaeon ISO4-H5 1495144 Archaea Archaea 436 5.229999999999999e-118   NTclustered gi|992543061|gb|CP014214.1| 1495144 g107383 i0 98.776 1 245 3 100 0 1 245 528859 528615 Methanogenic archaeon ISO4-H5 chromosome, complete genome blastn 245 436 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       methanogenic archaeon ISO4-H5
1708061 1708061 PRJNA437204_P_NODE_69662_length_265_cov_1.947917_g69363_i0 PRJNA437204 69662 265 1.947917 5.16198005 Methanobrevibacter ruminantium 83816 Archaea Archaea 344 3.57e-90   NTclustered gi|288541968|gb|CP001719.1| 634498 g69363 i0 90.262 8.86792452830189 267 20 99 4 1 264 2614529 2614266 Methanobrevibacter ruminantium M1, complete genome blastn 2350 344 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
2983364 2983364 PRJNA437204_P_NODE_46923_length_307_cov_1.316239_g46624_i0 PRJNA437204 46923 307 1.316239 4.04085373 Halovivax cerinus 1487865 Archaea Archaea 52.8 0.029   NTclustered gi|2279709464|gb|CP101824.1| 1487865 g46624 i0 100 0.0912052117263844 28 0 9 0 20 47 429192 429219 Halovivax cerinus strain IBRC-M 10256 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halovivax Halovivax cerinus
3640406 3640406 PRJNA437204_P_NODE_117843_length_243_cov_0.905882_g117544_i0 PRJNA437204 117843 243 0.905882 2.20129326 Methanobacteriaceae 2159 Archaea Archaea 76.8 1.3e-9   NTclustered gi|952971377|emb|LN734822.1| 2162 g117544 i0 97.727 20.4567901234568 44 1 18 0 197 240 728374 728417 Methanobacterium formicicum genome assembly isolate Mb9, chromosome : I blastn 4971 76.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium formicicum
5536535 5536535 PRJNA437204_P_NODE_53225_length_293_cov_4.559091_g52926_i0 PRJNA437204 53225 293 4.559091 13.35813663 Methanomassiliicoccales archaeon LGM-RCC1 3018355 Archaea Archaea 387 6.56e-103   NTclustered gi|2514099340|gb|CP115555.1| 3018355 g52926 i0 90.444 6.02389078498294 293 28 100 0 1 293 1399195 1399487 Methanomassiliicoccales archaeon LGM-RCC1 chromosome, complete genome blastn 1765 387 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon LGM-RCC1
5536834 5536834 PRJNA437204_P_NODE_69145_length_266_cov_1.585492_g68846_i0 PRJNA437204 69145 266 1.585492 4.21740872 Thermoplasmatales archaeon BRNA1 1054217 Archaea Archaea 241 4.840000000000001e-59   NTclustered gi|472831278|gb|CP002916.1| 1054217 g68846 i0 83.588 5.70676691729323 262 37 97 3 1 259 802300 802558 Thermoplasmatales archaeon BRNA1, complete genome blastn 1518 241 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon BRNA1
6809416 6809416 PRJNA437204_P_NODE_112366_length_244_cov_0.900585_g112067_i0 PRJNA437204 112366 244 0.900585 2.1974274 methanogenic archaeon ISO4-H5 1495144 Archaea Archaea 418 1.8799999999999994e-112   NTclustered gi|992543061|gb|CP014214.1| 1495144 g112067 i0 97.541 3.63934426229508 244 6 100 0 1 244 1313768 1313525 Methanogenic archaeon ISO4-H5 chromosome, complete genome blastn 888 418 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       methanogenic archaeon ISO4-H5
6810578 6810578 PRJNA437204_P_NODE_53846_length_292_cov_1.406393_g53547_i0 PRJNA437204 53846 292 1.406393 4.10666756 methanogenic archaeon ISO4-H5 1495144 Archaea Archaea 540 4.74e-149   NTclustered gi|992543061|gb|CP014214.1| 1495144 g53547 i0 100 34.3869863013699 292 0 100 0 1 292 1531864 1531573 Methanogenic archaeon ISO4-H5 chromosome, complete genome blastn 10041 540 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       methanogenic archaeon ISO4-H5
7468131 7468131 PRJNA437204_P_NODE_71266_length_263_cov_1.310526_g70967_i0 PRJNA437204 71266 263 1.310526 3.44668338 Methanobrevibacter 2172 Archaea Archaea 481 2.58e-131   NTclustered gi|1294447101|gb|CP017803.1| 2173 g70967 i0 99.62 144.201520912548 263 1 100 0 1 263 265248 264986 Methanobrevibacter smithii strain KB11 chromosome, complete genome blastn 37925 481 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
8084997 8084997 PRJNA437204_P_NODE_114267_length_244_cov_0.900585_g113968_i0 PRJNA437204 114267 244 0.900585 2.1974274 methanogenic archaeon ISO4-H5 1495144 Archaea Archaea 446 8.639999999999999e-121   NTclustered gi|992543061|gb|CP014214.1| 1495144 g113968 i0 99.59 2.95901639344262 244 1 100 0 1 244 1910381 1910624 Methanogenic archaeon ISO4-H5 chromosome, complete genome blastn 722 446 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       methanogenic archaeon ISO4-H5
8086459 8086459 PRJNA437204_P_NODE_73807_length_259_cov_1.650538_g73508_i0 PRJNA437204 73807 259 1.650538 4.27489342 Halosimplex aquaticum 3026162 Archaea Archaea 52.8 0.024   NTclustered gi|2446562038|gb|CP118158.1| 3026162 g73508 i0 100 0.108108108108108 28 0 11 0 214 241 3501527 3501554 Halosimplex aquaticum strain XZYJT29 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex aquaticum
9359808 9359808 PRJNA437204_P_NODE_112708_length_244_cov_0.900585_g112409_i0 PRJNA437204 112708 244 0.900585 2.1974274 Methanobrevibacter sp. YE315 1609968 Archaea Archaea 351 1.9399999999999998e-92   NTclustered gi|985614202|gb|CP010834.1| 1609968 g112409 i0 92.623 2.90163934426229 244 18 100 0 1 244 218749 218506 Methanobrevibacter sp. YE315, complete genome blastn 708 351 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. YE315
9360018 9360018 PRJNA437204_P_NODE_124848_length_241_cov_1.684524_g124549_i0 PRJNA437204 124848 241 1.684524 4.05970284 Haloarcula halobia 3033388 Archaea Archaea 52.8 0.022   NTclustered gi|2463595540|gb|CP119787.1| 3033388 g124549 i0 100 0.116182572614108 28 0 12 0 200 227 2516842 2516815 Haloarcula halobia strain XH51 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula halobia
9360109 9360109 PRJNA437204_P_NODE_129568_length_234_cov_4.726708_g129269_i0 PRJNA437204 129568 234 4.726708 11.06049672 Methanobrevibacter sp. YE315 1609968 Archaea Archaea 340 3.989999999999999e-89   NTclustered gi|985614202|gb|CP010834.1| 1609968 g129269 i0 92.797 12.4957264957265 236 15 100 2 1 234 1671767 1671532 Methanobrevibacter sp. YE315, complete genome blastn 2924 340 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. YE315
9361427 9361427 PRJNA437204_P_NODE_83028_length_251_cov_0.865169_g82729_i0 PRJNA437204 83028 251 0.865169 2.17157419 methanogenic archaeon ISO4-H5 1495144 Archaea Archaea 453 5.34e-123   NTclustered gi|992543061|gb|CP014214.1| 1495144 g82729 i0 99.597 0.98804780876494 248 1 99 0 1 248 238024 238271 Methanogenic archaeon ISO4-H5 chromosome, complete genome blastn 248 453 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       methanogenic archaeon ISO4-H5
10017912 10017912 PRJNA437204_P_NODE_37748_length_330_cov_4.688716_g37449_i0 PRJNA437204 37748 330 4.688716 15.4727628 Methanobrevibacter 2172 Archaea Archaea 601 2.46e-167   NTclustered gi|5725308|emb|AJ009959.1| 66852 g37449 i0 100 105.075757575758 325 0 98 0 6 330 1 325 Methanobrevibacter sp. NT7, 16S rRNA gene, partial blastn 34675 604 0.995033112582781 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
10636186 10636186 PRJNA437204_P_NODE_26809_length_370_cov_2.838384_g26510_i0 PRJNA437204 26809 370 2.838384 10.5020208 Methanosphaera sp. BMS 1789762 Archaea Archaea 667 0   NTclustered gi|1409374143|gb|CP014213.1| 1789762 g26510 i0 99.191 45.8135135135135 371 2 100 1 1 370 2067180 2066810 Methanosphaera sp. BMS chromosome, complete genome blastn 16951 667 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. BMS
10636717 10636717 PRJNA437204_P_NODE_52769_length_294_cov_2.484163_g52470_i0 PRJNA437204 52769 294 2.484163 7.30343922 Methanosphaera sp. BMS 1789762 Archaea Archaea 499 8.099999999999998e-137   NTclustered gi|1409374143|gb|CP014213.1| 1789762 g52470 i0 97.279 11.7517006802721 294 8 100 0 1 294 1090855 1090562 Methanosphaera sp. BMS chromosome, complete genome blastn 3455 499 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. BMS
10637492 10637492 PRJNA437204_P_NODE_93569_length_248_cov_0.880000_g93270_i0 PRJNA437204 93569 248 0.88 2.1824 Halopiger xanaduensis 387343 Archaea Archaea 54.7 0.006   NTclustered gi|335336085|gb|CP002839.1| 797210 g93270 i0 100 0.116935483870968 29 0 12 0 175 203 180678 180706 Halopiger xanaduensis SH-6, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halopiger Halopiger xanaduensis
10637519 10637519 PRJNA437204_P_NODE_9489_length_549_cov_2.296218_g9191_i0 PRJNA437204 9489 549 2.296218 12.60623682 methanogenic archaeon mixed culture ISO4-G1 1452364 Archaea Archaea 965 0   NTclustered gi|998155847|gb|CP013703.1| 1452364 g9191 i0 98.361 57.8324225865209 549 9 100 0 1 549 1291062 1290514 Methanogenic archaeon mixed culture ISO4-G1 chromosome, complete genome blastn 31750 965 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     methanogenic archaeon mixed culture ISO4-G1
12569026 12569026 PRJNA437204_P_NODE_7770_length_595_cov_1.429119_g7475_i0 PRJNA437204 7770 595 1.429119 8.50325805 Methanobrevibacter 2172 Archaea Archaea 1066 0   NTclustered gi|1651227316|emb|LR590664.1| 2173 g7475 i0 98.992 105.678991596639 595 6 100 0 1 595 11 605 Methanobrevibacter smithii partial 16S rRNA gene, strain C2 CSUR P5816 blastn 62879 1066 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
13187193 13187193 PRJNA437204_P_NODE_89791_length_249_cov_0.875000_g89492_i0 PRJNA437204 89791 249 0.875 2.17875 methanogenic archaeon ISO4-H5 1495144 Archaea Archaea 420 5.36e-113   NTclustered gi|992543061|gb|CP014214.1| 1495144 g89492 i0 97.177 2.00401606425703 248 7 99 0 1 248 1435027 1435274 Methanogenic archaeon ISO4-H5 chromosome, complete genome blastn 499 420 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       methanogenic archaeon ISO4-H5
19558074 19558074 PRJNA437204_P_NODE_21016_length_404_cov_1.362538_g20717_i0 PRJNA437204 21016 404 1.362538 5.50465352 Haloterrigena alkaliphila 2816475 Archaea Archaea 52.8 0.039   NTclustered gi|2006064443|gb|CP071462.1| 2816475 g20717 i0 100 0.0693069306930693 28 0 7 0 322 349 370035 370008 Haloterrigena alkaliphila strain KZCA68 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Haloterrigena Haloterrigena alkaliphila
19558698 19558698 PRJNA437204_P_NODE_52276_length_295_cov_15.873874_g51977_i0 PRJNA437204 52276 295 15.873874 46.8279283 Methanobrevibacter olleyae 294671 Archaea Archaea 401 2.3599999999999993e-107   NTclustered gi|998157363|gb|CP014265.1| 294671 g51977 i0 91.186 6.34237288135593 295 26 100 0 1 295 497420 497714 Methanobrevibacter olleyae strain YLM1 chromosome, complete genome blastn 1871 401 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter olleyae
20833749 20833749 PRJNA437204_P_NODE_14217_length_468_cov_6.881013_g13918_i0 PRJNA437204 14217 468 6.881013 32.20314084 methanogenic archaeon ISO4-H5 1495144 Archaea Archaea 859 0   NTclustered gi|992543061|gb|CP014214.1| 1495144 g13918 i0 99.786 87.6923076923077 468 1 100 0 1 468 1742090 1741623 Methanogenic archaeon ISO4-H5 chromosome, complete genome blastn 41040 859 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       methanogenic archaeon ISO4-H5
20834535 20834535 PRJNA437204_P_NODE_55377_length_289_cov_1.425926_g55078_i0 PRJNA437204 55377 289 1.425926 4.12092614 methanogenic archaeon ISO4-H5 1495144 Archaea Archaea 534 2.18e-147   NTclustered gi|992543061|gb|CP014214.1| 1495144 g55078 i0 100 7.31141868512111 289 0 100 0 1 289 882529 882817 Methanogenic archaeon ISO4-H5 chromosome, complete genome blastn 2113 534 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       methanogenic archaeon ISO4-H5
22109392 22109392 PRJNA437204_P_NODE_51338_length_297_cov_21.754464_g51039_i0 PRJNA437204 51338 297 21.754464 64.61075808 Methanobrevibacter ruminantium 83816 Archaea Archaea 333 8.8e-87   NTclustered gi|288541968|gb|CP001719.1| 634498 g51039 i0 86.869 3.57575757575758 297 39 100 0 1 297 1064333 1064629 Methanobrevibacter ruminantium M1, complete genome blastn 1062 333 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
22109614 22109614 PRJNA437204_P_NODE_63218_length_275_cov_2.737624_g62919_i0 PRJNA437204 63218 275 2.737624 7.528466 methanogenic archaeon ISO4-H5 1495144 Archaea Archaea 503 5.809999999999998e-138   NTclustered gi|992543061|gb|CP014214.1| 1495144 g62919 i0 99.636 7.56727272727273 275 1 100 0 1 275 1465332 1465606 Methanogenic archaeon ISO4-H5 chromosome, complete genome blastn 2081 503 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       methanogenic archaeon ISO4-H5
23383780 23383780 PRJNA437204_P_NODE_104679_length_246_cov_0.890173_g104380_i0 PRJNA437204 104679 246 0.890173 2.18982558 Methanomassiliicoccales archaeon LGM-RCC1 3018355 Archaea Archaea 455 1.4500000000000002e-123   NTclustered gi|2514099340|gb|CP115555.1| 3018355 g104380 i0 100 14.020325203252 246 0 100 0 1 246 143014 142769 Methanomassiliicoccales archaeon LGM-RCC1 chromosome, complete genome blastn 3449 455 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon LGM-RCC1
23384304 23384304 PRJNA437204_P_NODE_16559_length_442_cov_1.945799_g16260_i0 PRJNA437204 16559 442 1.945799 8.60043158 Natronorubrum daqingense 588898 Archaea Archaea 69.4 4.24e-7   NTclustered gi|1134979927|gb|CP019327.1| 588898 g16260 i0 85.294 0.153846153846154 68 8 15 2 148 214 592951 592885 Natronorubrum daqingense strain JX313, complete sequence blastn 68 69.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum daqingense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;