RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA437204" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA437204 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1707229 1707229 PRJNA437204_P_NODE_28742_length_362_cov_1.044983_g28443_i0 PRJNA437204 28742 362 1.044983 3.78283846 Linderina pennispora 61395 Fungi Fungi 344 5.06e-90   NTclustered gi|2028323432|ref|XM_040888084.1| 61395 g28443 i0 91.566 68.4613259668508 249 21 69 0 1 249 787 1035 Linderina pennispora 40S ribosomal protein S5 (DL89DRAFT_268926), mRNA blastn 24783 344 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
6810377 6810377 PRJNA437204_P_NODE_44346_length_313_cov_1.825000_g44047_i0 PRJNA437204 44346 313 1.825 5.71225 Linderina pennispora 61395 Fungi Fungi 351 2.58e-92   NTclustered gi|2028322926|ref|XM_040888010.1| 61395 g44047 i0 87.296 88.779552715655 307 39 98 0 1 307 925 619 Linderina pennispora 60S ribosomal protein L10-A (DL89DRAFT_268696), partial mRNA blastn 27788 351 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
15734774 15734774 PRJNA437204_P_NODE_18213_length_426_cov_6.124646_g17914_i0 PRJNA437204 18213 426 6.124646 26.09099196 Linderina pennispora 61395 Fungi Fungi 394 5.919999999999998e-105   NTclustered gi|2028315762|ref|XM_040886762.1| 61395 g17914 i0 85.195 87.2441314553991 385 55 90 2 43 426 975 592 Linderina pennispora ubiquitin-domain-containing protein (DL89DRAFT_265656), partial mRNA blastn 37166 394 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
24659293 24659293 PRJNA437204_P_NODE_62380_length_277_cov_1.142157_g62081_i0 PRJNA437204 62380 277 1.142157 3.16377489 Linderina pennispora 61395 Fungi Fungi 363 1.0399999999999999e-95   NTclustered gi|2028320758|ref|XM_040890372.1| 61395 g62081 i0 91.353 97.3790613718412 266 21 96 2 6 270 75 339 Linderina pennispora Mal s 6 allergen (DL89DRAFT_293224), partial mRNA blastn 26974 363 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;