contig_metadata
56 rows where analysis = "blastn", bioproject = "PRJNA437204" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 432338 | 432338 | PRJNA437204_P_NODE_29541_length_358_cov_27.231579_g29242_i0 | PRJNA437204 | 29541 | 358 | 27.231579 | 97.48905282 | Treponema bryantii | 163 | Bacteria | Bacteria | 235 | 3.1399999999999996e-57 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g29242 | i0 | 79.032 | 1.38268156424581 | 372 | 57 | 99 | 11 | 3 | 355 | 2063204 | 2063573 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 495 | 235 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 1090277 | 1090277 | PRJNA437204_P_NODE_8981_length_562_cov_1.300613_g8684_i0 | PRJNA437204 | 8981 | 562 | 1.300613 | 7.30944506 | Treponema | 157 | Bacteria | Bacteria | 693 | 0 | NTclustered | gi|2189493055|gb|CP091738.1| | 167 | g8684 | i0 | 89.209 | 203.274021352313 | 556 | 59 | 99 | 1 | 3 | 557 | 287494 | 286939 | MAG: Treponema succinifaciens isolate nC27_bin.114.fa chromosome | blastn | 114240 | 693 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 1706366 | 1706366 | PRJNA437204_P_NODE_100702_length_247_cov_0.885057_g100403_i0 | PRJNA437204 | 100702 | 247 | 0.885057 | 2.18609079 | Leptospira sp. 'Mane' | 3387407 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2889308543|gb|CP177134.1| | 3387407 | g100403 | i0 | 100 | 0.11336032388664 | 28 | 0 | 11 | 0 | 48 | 75 | 2737128 | 2737101 | Leptospira sp. 'Mane' chromosome 1, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. 'Mane' | ||
| 1706595 | 1706595 | PRJNA437204_P_NODE_111922_length_244_cov_0.900585_g111623_i0 | PRJNA437204 | 111922 | 244 | 0.900585 | 2.1974274 | Treponema ruminis | 744515 | Bacteria | Bacteria | 424 | 4.05e-114 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g111623 | i0 | 97.951 | 84.1598360655738 | 244 | 5 | 100 | 0 | 1 | 244 | 644477 | 644234 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 20535 | 424 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 1707038 | 1707038 | PRJNA437204_P_NODE_18322_length_425_cov_4.159091_g18023_i0 | PRJNA437204 | 18322 | 425 | 4.159091 | 17.67613675 | Treponema peruense | 2787628 | Bacteria | Bacteria | 431 | 4.4999999999999996e-116 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g18023 | i0 | 85.047 | 55.08 | 428 | 58 | 100 | 4 | 1 | 425 | 1010705 | 1011129 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 23409 | 431 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 1707464 | 1707464 | PRJNA437204_P_NODE_40682_length_322_cov_6.309237_g40383_i0 | PRJNA437204 | 40682 | 322 | 6.309237 | 20.31574314 | Sphaerochaeta pleomorpha | 1131707 | Bacteria | Bacteria | 147 | 1.35e-30 | NTclustered | gi|359350094|gb|CP003155.1| | 158190 | g40383 | i0 | 76.61 | 48.0031055900621 | 295 | 51 | 89 | 14 | 8 | 294 | 487154 | 487438 | Sphaerochaeta pleomorpha str. Grapes, complete genome | blastn | 15457 | 147 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta pleomorpha | ||
| 1707754 | 1707754 | PRJNA437204_P_NODE_54402_length_291_cov_1.412844_g54103_i0 | PRJNA437204 | 54402 | 291 | 1.412844 | 4.11137604 | Treponema bryantii | 163 | Bacteria | Bacteria | 340 | 5.139999999999999e-89 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g54103 | i0 | 89.051 | 67.7044673539519 | 274 | 30 | 94 | 0 | 5 | 278 | 2409638 | 2409365 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 19702 | 340 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 2982145 | 2982145 | PRJNA437204_P_NODE_100463_length_247_cov_0.885057_g100164_i0 | PRJNA437204 | 100463 | 247 | 0.885057 | 2.18609079 | Treponema ruminis | 744515 | Bacteria | Bacteria | 424 | 4.1099999999999996e-114 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g100164 | i0 | 97.571 | 1 | 247 | 6 | 100 | 0 | 1 | 247 | 524441 | 524687 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 247 | 424 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 2982603 | 2982603 | PRJNA437204_P_NODE_125603_length_241_cov_0.916667_g125304_i0 | PRJNA437204 | 125603 | 241 | 0.916667 | 2.20916747 | Treponema ruminis | 744515 | Bacteria | Bacteria | 180 | 9.539999999999999e-41 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g125304 | i0 | 83.019 | 0.879668049792531 | 212 | 23 | 86 | 9 | 19 | 225 | 2213178 | 2213381 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 212 | 180 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 2982854 | 2982854 | PRJNA437204_P_NODE_22863_length_392_cov_1.028213_g22564_i0 | PRJNA437204 | 22863 | 392 | 1.028213 | 4.03059496 | Treponema bryantii | 163 | Bacteria | Bacteria | 364 | 4.239999999999998e-96 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g22564 | i0 | 83.698 | 18.5688775510204 | 411 | 41 | 99 | 14 | 1 | 390 | 466714 | 466309 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 7279 | 364 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 2982862 | 2982862 | PRJNA437204_P_NODE_23403_length_388_cov_16.539683_g23104_i0 | PRJNA437204 | 23403 | 388 | 16.539683 | 64.17397004 | Treponema ruminis | 744515 | Bacteria | Bacteria | 547 | 3.8799999999999996e-151 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g23104 | i0 | 92.526 | 26.1262886597938 | 388 | 19 | 100 | 5 | 1 | 388 | 1470573 | 1470196 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 10137 | 547 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 2983130 | 2983130 | PRJNA437204_P_NODE_36723_length_333_cov_3.580769_g36424_i0 | PRJNA437204 | 36723 | 333 | 3.580769 | 11.92396077 | Treponema bryantii | 163 | Bacteria | Bacteria | 477 | 4.37e-130 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g36424 | i0 | 92.492 | 86.8978978978979 | 333 | 25 | 100 | 0 | 1 | 333 | 704541 | 704209 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 28937 | 477 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 2983341 | 2983341 | PRJNA437204_P_NODE_45863_length_310_cov_0.974684_g45564_i0 | PRJNA437204 | 45863 | 310 | 0.974684 | 3.0215204 | Treponema bryantii | 163 | Bacteria | Bacteria | 219 | 2.7e-52 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g45564 | i0 | 79.805 | 0.990322580645161 | 307 | 56 | 98 | 5 | 7 | 310 | 3105472 | 3105169 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 307 | 219 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 2983451 | 2983451 | PRJNA437204_P_NODE_51403_length_297_cov_1.919643_g51104_i0 | PRJNA437204 | 51403 | 297 | 1.919643 | 5.70133971 | Treponema ruminis | 744515 | Bacteria | Bacteria | 333 | 8.8e-87 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g51104 | i0 | 87.248 | 26.7878787878788 | 298 | 31 | 99 | 4 | 2 | 295 | 1470536 | 1470242 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 7956 | 333 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 2984286 | 2984286 | PRJNA437204_P_NODE_96463_length_248_cov_0.880000_g96164_i0 | PRJNA437204 | 96463 | 248 | 0.88 | 2.1824 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 176 | 1.28e-39 | NTclustered | gi|2907625707|emb|OZ223267.1| | 2053615 | g96164 | i0 | 79.762 | 17.8064516129032 | 252 | 43 | 100 | 6 | 1 | 248 | 195310 | 195557 | MAG: Spirochaetia bacterium isolate 50ab941f-e521-41e2-bb97-00a459704a5b genome assembly, chromosome: 4 | blastn | 4416 | 176 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 4259457 | 4259457 | PRJNA437204_P_NODE_33884_length_342_cov_2.167286_g33585_i0 | PRJNA437204 | 33884 | 342 | 2.167286 | 7.41211812 | Treponema bryantii | 163 | Bacteria | Bacteria | 158 | 6.6599999999999985e-34 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g33585 | i0 | 81.068 | 0.60233918128655 | 206 | 31 | 59 | 8 | 3 | 205 | 622313 | 622113 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 206 | 158 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 4260412 | 4260412 | PRJNA437204_P_NODE_84644_length_250_cov_0.870056_g84345_i0 | PRJNA437204 | 84644 | 250 | 0.870056 | 2.17514 | Treponema ruminis | 744515 | Bacteria | Bacteria | 316 | 7.269999999999998e-82 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g84345 | i0 | 89.558 | 0.996 | 249 | 26 | 99 | 0 | 1 | 249 | 1979022 | 1979270 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 249 | 316 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 5535269 | 5535269 | PRJNA437204_P_NODE_102365_length_246_cov_0.890173_g102066_i0 | PRJNA437204 | 102365 | 246 | 0.890173 | 2.18982558 | Treponema ruminis | 744515 | Bacteria | Bacteria | 435 | 1.8900000000000003e-117 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g102066 | i0 | 98.77 | 2 | 244 | 3 | 99 | 0 | 1 | 244 | 743215 | 742972 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 492 | 435 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 5535648 | 5535648 | PRJNA437204_P_NODE_123565_length_242_cov_0.911243_g123266_i0 | PRJNA437204 | 123565 | 242 | 0.911243 | 2.20520806 | Treponema ruminis | 744515 | Bacteria | Bacteria | 226 | 1.2099999999999997e-54 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g123266 | i0 | 84.188 | 7.97933884297521 | 234 | 35 | 96 | 2 | 10 | 242 | 2039349 | 2039117 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 1931 | 226 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 5536481 | 5536481 | PRJNA437204_P_NODE_5085_length_700_cov_144.491228_g4802_i0 | PRJNA437204 | 5085 | 700 | 144.491228 | 1011.438596 | Treponema ruminis | 744515 | Bacteria | Bacteria | 180 | 3.07e-40 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g4802 | i0 | 99 | 15.0228571428571 | 100 | 1 | 14 | 0 | 198 | 297 | 707885 | 707984 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 10516 | 180 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 6809809 | 6809809 | PRJNA437204_P_NODE_15666_length_451_cov_40.751323_g15367_i0 | PRJNA437204 | 15666 | 451 | 40.751323 | 183.78846673 | Treponema sp. Marseille-Q4132 | 2766701 | Bacteria | Bacteria | 167 | 1.5e-36 | NTclustered | gi|1897717435|gb|CP060591.1| | 2766701 | g15367 | i0 | 76.997 | 7.74722838137472 | 313 | 59 | 69 | 11 | 44 | 353 | 330801 | 330499 | Treponema sp. Marseille-Q4132 chromosome | blastn | 3494 | 167 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. Marseille-Q4132 | ||
| 6809995 | 6809995 | PRJNA437204_P_NODE_25806_length_375_cov_1.778146_g25507_i0 | PRJNA437204 | 25806 | 375 | 1.778146 | 6.6680475 | Treponema ruminis | 744515 | Bacteria | Bacteria | 346 | 1.46e-90 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g25507 | i0 | 84.857 | 1.94933333333333 | 350 | 45 | 93 | 7 | 28 | 375 | 1470230 | 1470573 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 731 | 346 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 8085292 | 8085292 | PRJNA437204_P_NODE_130167_length_220_cov_5.938776_g129868_i0 | PRJNA437204 | 130167 | 220 | 5.938776 | 13.0653072 | Treponema succinifaciens | 167 | Bacteria | Bacteria | 169 | 1.85e-37 | NTclustered | gi|328447254|gb|CP002631.1| | 869209 | g129868 | i0 | 81.279 | 2.59545454545455 | 219 | 32 | 97 | 9 | 1 | 213 | 841802 | 841587 | Treponema succinifaciens DSM 2489, complete genome | blastn | 571 | 169 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 8085624 | 8085624 | PRJNA437204_P_NODE_31847_length_349_cov_12.456522_g31548_i0 | PRJNA437204 | 31847 | 349 | 12.456522 | 43.47326178 | Treponema ruminis | 744515 | Bacteria | Bacteria | 623 | 5.569999999999999e-174 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g31548 | i0 | 98.854 | 1 | 349 | 4 | 100 | 0 | 1 | 349 | 893382 | 893730 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 349 | 623 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 8086115 | 8086115 | PRJNA437204_P_NODE_55547_length_289_cov_1.342593_g55248_i0 | PRJNA437204 | 55547 | 289 | 1.342593 | 3.88009377 | Treponema peruense | 2787628 | Bacteria | Bacteria | 252 | 2.46e-62 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g55248 | i0 | 85.081 | 3.30449826989619 | 248 | 35 | 85 | 2 | 16 | 262 | 1099486 | 1099240 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 955 | 252 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 8086487 | 8086487 | PRJNA437204_P_NODE_75107_length_257_cov_1.673913_g74808_i0 | PRJNA437204 | 75107 | 257 | 1.673913 | 4.30195641 | Treponema parvum | 138851 | Bacteria | Bacteria | 163 | 1.04e-35 | NTclustered | gi|2023444933|gb|CP054257.1| | 138851 | g74808 | i0 | 83.77 | 60.8210116731518 | 191 | 12 | 74 | 8 | 1 | 191 | 1121393 | 1121564 | Treponema parvum strain ATCC 700773 chromosome, complete genome | blastn | 15631 | 163 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema parvum | ||
| 9360356 | 9360356 | PRJNA437204_P_NODE_25408_length_377_cov_4.500000_g25109_i0 | PRJNA437204 | 25408 | 377 | 4.5 | 16.965 | Treponema succinifaciens | 167 | Bacteria | Bacteria | 265 | 4.24e-66 | NTclustered | gi|328447254|gb|CP002631.1| | 869209 | g25109 | i0 | 82.792 | 4.72679045092838 | 308 | 42 | 81 | 9 | 29 | 334 | 1328786 | 1329084 | Treponema succinifaciens DSM 2489, complete genome | blastn | 1782 | 265 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 9361607 | 9361607 | PRJNA437204_P_NODE_92648_length_248_cov_1.834286_g92349_i0 | PRJNA437204 | 92648 | 248 | 1.834286 | 4.54902928 | Treponema succinifaciens | 167 | Bacteria | Bacteria | 250 | 7.41e-62 | NTclustered | gi|328447254|gb|CP002631.1| | 869209 | g92349 | i0 | 85.772 | 2.79838709677419 | 246 | 23 | 97 | 10 | 3 | 242 | 841795 | 841556 | Treponema succinifaciens DSM 2489, complete genome | blastn | 694 | 250 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 10636597 | 10636597 | PRJNA437204_P_NODE_47009_length_307_cov_1.316239_g46710_i0 | PRJNA437204 | 47009 | 307 | 1.316239 | 4.04085373 | Treponema sp. | 166 | Bacteria | Bacteria | 263 | 1.22e-65 | NTclustered | gi|2189480979|gb|CP091737.1| | 166 | g46710 | i0 | 86.066 | 9.42671009771987 | 244 | 34 | 79 | 0 | 3 | 246 | 645090 | 645333 | MAG: Treponema sp. isolate nC27_bin.160.fa chromosome | blastn | 2894 | 263 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 10637009 | 10637009 | PRJNA437204_P_NODE_67989_length_268_cov_1.266667_g67690_i0 | PRJNA437204 | 67989 | 268 | 1.266667 | 3.39466756 | Treponema ruminis | 744515 | Bacteria | Bacteria | 337 | 6.05e-88 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g67690 | i0 | 89.474 | 0.992537313432836 | 266 | 28 | 99 | 0 | 3 | 268 | 2137213 | 2136948 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 266 | 337 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 10637286 | 10637286 | PRJNA437204_P_NODE_8289_length_579_cov_1.768775_g7993_i0 | PRJNA437204 | 8289 | 579 | 1.768775 | 10.24120725 | Treponema succinifaciens | 167 | Bacteria | Bacteria | 553 | 1.2899999999999995e-152 | NTclustered | gi|328447254|gb|CP002631.1| | 869209 | g7993 | i0 | 85.499 | 23.4784110535406 | 531 | 75 | 92 | 2 | 1 | 530 | 2000298 | 1999769 | Treponema succinifaciens DSM 2489, complete genome | blastn | 13594 | 553 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 11910493 | 11910493 | PRJNA437204_P_NODE_11470_length_509_cov_1.412844_g11172_i0 | PRJNA437204 | 11470 | 509 | 1.412844 | 7.19137596 | Treponema bryantii | 163 | Bacteria | Bacteria | 448 | 5.44e-121 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g11172 | i0 | 84.144 | 31.6876227897839 | 473 | 63 | 91 | 9 | 28 | 488 | 469834 | 469362 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 16129 | 448 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 11910750 | 11910750 | PRJNA437204_P_NODE_129850_length_229_cov_4.262821_g129551_i0 | PRJNA437204 | 129850 | 229 | 4.262821 | 9.76186009 | Treponema bryantii | 163 | Bacteria | Bacteria | 278 | 3.1e-70 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g129551 | i0 | 88.596 | 1.51091703056769 | 228 | 26 | 99 | 0 | 2 | 229 | 2408938 | 2409165 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 346 | 278 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 11911033 | 11911033 | PRJNA437204_P_NODE_26990_length_369_cov_8.949324_g26691_i0 | PRJNA437204 | 26990 | 369 | 8.949324 | 33.02300556 | Treponema sp. | 166 | Bacteria | Bacteria | 283 | 1.14e-71 | NTclustered | gi|2189480979|gb|CP091737.1| | 166 | g26691 | i0 | 81.016 | 155.525745257453 | 374 | 55 | 99 | 14 | 1 | 368 | 2006278 | 2006641 | MAG: Treponema sp. isolate nC27_bin.160.fa chromosome | blastn | 57389 | 283 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 13185798 | 13185798 | PRJNA437204_P_NODE_16811_length_440_cov_1.258856_g16512_i0 | PRJNA437204 | 16811 | 440 | 1.258856 | 5.5389664 | Treponema bryantii | 163 | Bacteria | Bacteria | 298 | 4.95e-76 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g16512 | i0 | 79.212 | 1.03863636363636 | 457 | 73 | 99 | 11 | 2 | 438 | 2059849 | 2060303 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 457 | 298 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 13186907 | 13186907 | PRJNA437204_P_NODE_74571_length_258_cov_1.535135_g74272_i0 | PRJNA437204 | 74571 | 258 | 1.535135 | 3.9606483 | Treponema ruminis | 744515 | Bacteria | Bacteria | 390 | 4.38e-104 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g74272 | i0 | 94.466 | 154.786821705426 | 253 | 14 | 98 | 0 | 3 | 255 | 705938 | 706190 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 39935 | 390 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 13843328 | 13843328 | PRJNA437204_P_NODE_38831_length_327_cov_2.374016_g38532_i0 | PRJNA437204 | 38831 | 327 | 2.374016 | 7.76303232 | Treponema | 157 | Bacteria | Bacteria | 305 | 2.14e-78 | NTclustered | gi|2189493055|gb|CP091738.1| | 167 | g38532 | i0 | 83.841 | 110.929663608563 | 328 | 45 | 100 | 8 | 1 | 321 | 286539 | 286865 | MAG: Treponema succinifaciens isolate nC27_bin.114.fa chromosome | blastn | 36274 | 305 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 14460485 | 14460485 | PRJNA437204_P_NODE_111972_length_244_cov_0.900585_g111673_i0 | PRJNA437204 | 111972 | 244 | 0.900585 | 2.1974274 | Treponema bryantii | 163 | Bacteria | Bacteria | 141 | 4.57e-29 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g111673 | i0 | 79.098 | 1.2827868852459 | 244 | 22 | 99 | 16 | 4 | 244 | 1919760 | 1919543 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 313 | 141 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 14460878 | 14460878 | PRJNA437204_P_NODE_15612_length_452_cov_1.807388_g15313_i0 | PRJNA437204 | 15612 | 452 | 1.807388 | 8.16939376 | Treponema bryantii | 163 | Bacteria | Bacteria | 344 | 6.449999999999999e-90 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g15313 | i0 | 82.09 | 3.7787610619469 | 402 | 72 | 89 | 0 | 16 | 417 | 2231505 | 2231104 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 1708 | 344 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 14460983 | 14460983 | PRJNA437204_P_NODE_20952_length_404_cov_2.326284_g20653_i0 | PRJNA437204 | 20952 | 404 | 2.326284 | 9.39818736 | Treponema peruense | 2787628 | Bacteria | Bacteria | 289 | 2.71e-73 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g20653 | i0 | 79.95 | 17.9975247524752 | 404 | 71 | 99 | 10 | 1 | 399 | 1011127 | 1010729 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 7271 | 289 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 15734377 | 15734377 | PRJNA437204_P_NODE_114993_length_244_cov_0.900585_g114694_i0 | PRJNA437204 | 114993 | 244 | 0.900585 | 2.1974274 | Treponema ruminis | 744515 | Bacteria | Bacteria | 204 | 5.74e-48 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g114694 | i0 | 93.431 | 0.561475409836066 | 137 | 9 | 56 | 0 | 8 | 144 | 1509641 | 1509505 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 137 | 204 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 15734494 | 15734494 | PRJNA437204_P_NODE_12113_length_498_cov_2.482353_g11815_i0 | PRJNA437204 | 12113 | 498 | 2.482353 | 12.36211794 | Treponema bryantii | 163 | Bacteria | Bacteria | 451 | 4.099999999999999e-122 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g11815 | i0 | 83.333 | 5.01606425702811 | 504 | 68 | 99 | 14 | 1 | 496 | 1428743 | 1428248 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 2498 | 451 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 17008790 | 17008790 | PRJNA437204_P_NODE_101734_length_246_cov_1.728324_g101435_i0 | PRJNA437204 | 101734 | 246 | 1.728324 | 4.25167704 | Treponema ruminis | 744515 | Bacteria | Bacteria | 176 | 1.26e-39 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g101435 | i0 | 94.69 | 0.939024390243902 | 113 | 6 | 46 | 0 | 1 | 113 | 2325145 | 2325257 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 231 | 176 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 17009550 | 17009550 | PRJNA437204_P_NODE_25934_length_375_cov_1.013245_g25635_i0 | PRJNA437204 | 25934 | 375 | 1.013245 | 3.79966875 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 283 | 1.16e-71 | NTclustered | gi|2621785583|emb|OY782041.1| | 2053615 | g25635 | i0 | 81.953 | 5.32533333333333 | 338 | 58 | 90 | 3 | 7 | 342 | 608617 | 608281 | MAG: Spirochaetia bacterium isolate d8b3d310-4ac7-4817-9bde-c02243007ba8 genome assembly, chromosome: 1 | blastn | 1997 | 283 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 17667362 | 17667362 | PRJNA437204_P_NODE_34634_length_340_cov_1.153558_g34335_i0 | PRJNA437204 | 34634 | 340 | 1.153558 | 3.9220972 | Treponema | 157 | Bacteria | Bacteria | 431 | 3.529999999999999e-116 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g34335 | i0 | 89.535 | 31 | 344 | 31 | 100 | 5 | 1 | 340 | 1069941 | 1070283 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 10540 | 433 | 0.995381062355658 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 18283896 | 18283896 | PRJNA437204_P_NODE_25055_length_379_cov_8.722222_g24756_i0 | PRJNA437204 | 25055 | 379 | 8.722222 | 33.05722138 | Treponema peruense | 2787628 | Bacteria | Bacteria | 270 | 9.16e-68 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g24756 | i0 | 80.84 | 1.00527704485488 | 381 | 42 | 100 | 22 | 1 | 379 | 1703213 | 1703564 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 381 | 270 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 18284042 | 18284042 | PRJNA437204_P_NODE_33555_length_343_cov_13.477778_g33256_i0 | PRJNA437204 | 33555 | 343 | 13.477778 | 46.22877854 | Treponema succinifaciens | 167 | Bacteria | Bacteria | 185 | 3.0599999999999995e-42 | NTclustered | gi|328447254|gb|CP002631.1| | 869209 | g33256 | i0 | 86.628 | 3.58600583090379 | 172 | 18 | 50 | 3 | 52 | 222 | 1329049 | 1328882 | Treponema succinifaciens DSM 2489, complete genome | blastn | 1230 | 185 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema succinifaciens | ||
| 19558272 | 19558272 | PRJNA437204_P_NODE_31156_length_352_cov_1.440860_g30857_i0 | PRJNA437204 | 31156 | 352 | 1.44086 | 5.0718272 | Treponema ruminis | 744515 | Bacteria | Bacteria | 217 | 1.11e-51 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g30857 | i0 | 87.978 | 0.519886363636364 | 183 | 22 | 52 | 0 | 1 | 183 | 2136269 | 2136087 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 183 | 217 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 19559178 | 19559178 | PRJNA437204_P_NODE_75776_length_256_cov_1.683060_g75477_i0 | PRJNA437204 | 75776 | 256 | 1.68306 | 4.3086336 | Treponema bryantii | 163 | Bacteria | Bacteria | 252 | 2.14e-62 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g75477 | i0 | 86.047 | 18.29296875 | 258 | 9 | 100 | 8 | 1 | 256 | 734531 | 734763 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 4683 | 252 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 20834047 | 20834047 | PRJNA437204_P_NODE_30537_length_355_cov_0.698582_g30238_i0 | PRJNA437204 | 30537 | 355 | 0.698582 | 2.4799661 | Treponema medium | 58231 | Bacteria | Bacteria | 473 | 6.05e-129 | NTclustered | gi|1996291085|gb|CP027017.1| | 58231 | g30238 | i0 | 99.615 | 270.239436619718 | 260 | 0 | 73 | 1 | 96 | 355 | 1015267 | 1015525 | Treponema medium strain T19 chromosome, complete genome | blastn | 95935 | 473 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema medium | ||
| 23384026 | 23384026 | PRJNA437204_P_NODE_118619_length_243_cov_0.905882_g118320_i0 | PRJNA437204 | 118619 | 243 | 0.905882 | 2.20129326 | Treponema bryantii | 163 | Bacteria | Bacteria | 241 | 4.36e-59 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g118320 | i0 | 85.837 | 0.958847736625514 | 233 | 25 | 95 | 6 | 1 | 230 | 488933 | 488706 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 233 | 241 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 23384575 | 23384575 | PRJNA437204_P_NODE_30799_length_353_cov_18.450000_g30500_i0 | PRJNA437204 | 30799 | 353 | 18.45 | 65.1285 | Treponema peruense | 2787628 | Bacteria | Bacteria | 263 | 1.42e-65 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g30500 | i0 | 85.771 | 10.4844192634561 | 253 | 31 | 71 | 4 | 102 | 353 | 1703319 | 1703567 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 3701 | 263 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 23385177 | 23385177 | PRJNA437204_P_NODE_62059_length_277_cov_2.171569_g61760_i0 | PRJNA437204 | 62059 | 277 | 2.171569 | 6.01524613 | Treponema ruminis | 744515 | Bacteria | Bacteria | 490 | 4.56e-134 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g61760 | i0 | 98.561 | 1.00361010830325 | 278 | 2 | 100 | 2 | 1 | 277 | 2469399 | 2469123 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 278 | 490 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 23385800 | 23385800 | PRJNA437204_P_NODE_95059_length_248_cov_0.880000_g94760_i0 | PRJNA437204 | 95059 | 248 | 0.88 | 2.1824 | Treponema bryantii | 163 | Bacteria | Bacteria | 296 | 9.39e-76 | NTclustered | gi|2581915939|dbj|AP025286.1| | 163 | g94760 | i0 | 91.244 | 63.1935483870968 | 217 | 19 | 88 | 0 | 24 | 240 | 474672 | 474456 | Treponema bryantii JCM 32280 DNA, complete genome | blastn | 15672 | 296 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema bryantii | ||
| 24657830 | 24657830 | PRJNA437204_P_NODE_101620_length_246_cov_1.780347_g101321_i0 | PRJNA437204 | 101620 | 246 | 1.780347 | 4.37965362 | Treponema peruense | 2787628 | Bacteria | Bacteria | 204 | 5.799999999999998e-48 | NTclustered | gi|1946838279|gb|CP064936.1| | 2787628 | g101321 | i0 | 82 | 3.04878048780488 | 250 | 36 | 100 | 9 | 1 | 246 | 1269678 | 1269922 | Treponema peruense strain RCC2812 chromosome, complete genome | blastn | 750 | 204 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema peruense | ||
| 24658303 | 24658303 | PRJNA437204_P_NODE_128180_length_241_cov_0.916667_g127881_i0 | PRJNA437204 | 128180 | 241 | 0.916667 | 2.20916747 | Treponema ruminis | 744515 | Bacteria | Bacteria | 281 | 2.54e-71 | NTclustered | gi|1996301026|gb|CP031518.1| | 744515 | g127881 | i0 | 87.866 | 0.991701244813278 | 239 | 29 | 99 | 0 | 3 | 241 | 2323550 | 2323788 | Treponema ruminis strain RU1 chromosome, complete genome | blastn | 239 | 281 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;