RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA437204" and tax_phylum = "Priapulida"

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tax_superkingdom 1

tax_phylum 1

  • Priapulida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA437204 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2983808 2983808 PRJNA437204_P_NODE_68463_length_267_cov_1.587629_g68164_i0 PRJNA437204 68463 267 1.587629 4.23896943 Priapulus caudatus 37621 Priapulida other_Eukaryota 244 3.76e-60   NTclustered gi|957829796|ref|XM_014809339.1| 37621 g68164 i0 83.333 11.0337078651685 270 39 100 5 1 267 2760 3026 PREDICTED: Priapulus caudatus splicing factor 3B subunit 1-like (LOC106807090), mRNA blastn 2946 244 1 Eukaryota Opisthokonta Metazoa Priapulida Priapulimorpha Priapulimorphida Priapulidae Priapulus Priapulus caudatus
20835048 20835048 PRJNA437204_P_NODE_8257_length_580_cov_1.530572_g7961_i0 PRJNA437204 8257 580 1.530572 8.8773176 Priapulus caudatus 37621 Priapulida other_Eukaryota 446 2.25e-120   NTclustered gi|957824943|ref|XM_014806747.1| 37621 g7961 i0 81.019 56.8706896551724 569 100 97 8 16 580 973 409 PREDICTED: Priapulus caudatus NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like (LOC106805230), transcript variant X2, mRNA blastn 32985 446 1 Eukaryota Opisthokonta Metazoa Priapulida Priapulimorpha Priapulimorphida Priapulidae Priapulus Priapulus caudatus
24659968 24659968 PRJNA437204_P_NODE_98520_length_247_cov_0.885057_g98221_i0 PRJNA437204 98520 247 0.885057 2.18609079 Priapulus caudatus 37621 Priapulida other_Eukaryota 141 4.63e-29   NTclustered gi|957858457|ref|XM_014822816.1| 37621 g98221 i0 84.892 6.46558704453441 139 21 56 0 10 148 1710 1572 PREDICTED: Priapulus caudatus brain tumor protein-like (LOC106818100), partial mRNA blastn 1597 141 1 Eukaryota Opisthokonta Metazoa Priapulida Priapulimorpha Priapulimorphida Priapulidae Priapulus Priapulus caudatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;