RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA437204" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA437204 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1090302 1090302 PRJNA437204_P_NODE_92961_length_248_cov_1.320000_g92662_i0 PRJNA437204 92961 248 1.32 3.2736 Mycale 86015 Porifera other_Eukaryota 176 1.28e-39   NTclustered gi|514227091|gb|KC961671.1| 458504 g92662 i0 90.909 33.5322580645161 132 10 53 2 3 133 227 97 Mycale laxissima voucher UERJ4 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 8316 176 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Poecilosclerida Mycalidae Mycale Mycale laxissima
9360016 9360016 PRJNA437204_P_NODE_124748_length_241_cov_1.833333_g124449_i0 PRJNA437204 124748 241 1.833333 4.41833253 Dysidea avara 196820 Porifera other_Eukaryota 163 9.61e-36   NTclustered gi|2749586762|ref|XM_066059464.1| 196820 g124449 i0 80.374 3.07883817427386 214 42 89 0 18 231 176 389 PREDICTED: Dysidea avara ras-related protein Rab-2A (LOC136264685), mRNA blastn 742 163 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
9360230 9360230 PRJNA437204_P_NODE_18588_length_423_cov_1.748571_g18289_i0 PRJNA437204 18588 423 1.748571 7.39645533 Haliclona sp. BKON-2565 3127636 Porifera other_Eukaryota 209 2.28e-49   NTclustered gi|2899163455|gb|PP464275.1| 3127636 g18289 i0 77.688 55.1536643026005 372 64 86 12 7 368 2197 1835 Haliclona sp. BKON-2565 isolate H2565 mitochondrion, complete genome blastn 23330 209 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Chalinidae Haliclona Haliclona sp. BKON-2565
20833174 20833174 PRJNA437204_P_NODE_101177_length_247_cov_0.885057_g100878_i0 PRJNA437204 101177 247 0.885057 2.18609079 Sycon ciliatum 27933 Porifera other_Eukaryota 156 1.65e-33   NTclustered gi|2732912861|ref|XM_065323227.1| 27933 g100878 i0 80.952 14.4493927125506 210 28 83 8 43 246 803 600 PREDICTED: Sycon ciliatum pre-mRNA-splicing factor syf2-like (LOC135809801), mRNA blastn 3569 156 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;