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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA437204" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA437204 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2983927 2983927 PRJNA437204_P_NODE_74783_length_258_cov_1.243243_g74484_i0 PRJNA437204 74783 258 1.243243 3.20756694 Spizellomyces punctatus 109760 Fungi Fungi 152 2.2499999999999995e-32   NTclustered gi|1026972419|ref|XM_016751697.1| 645134 g74484 i0 85.135 4.3875968992248104 148 22 57 0 10 157 97 244 Spizellomyces punctatus DAOM BR117 60S ribosomal protein (SPPG_03431), mRNA blastn 1132 152 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
5536017 5536017 PRJNA437204_P_NODE_27205_length_368_cov_8.054237_g26906_i0 PRJNA437204 27205 368 8.054237 29.63959216 Polychytrium aggregatum 110093 Fungi Fungi 150 1.2099999999999999e-31   NTclustered gi|2432158676|ref|XM_053113190.1| 110093 g26906 i0 79.439 41.6032608695652 214 42 58 2 100 312 276 64 Polychytrium aggregatum ribosomal protein S25 component of cytosolic 80S ribosome and 40S small subunit (BJ171DRAFT_559057), partial mRNA blastn 15310 150 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
8085321 8085321 PRJNA437204_P_NODE_14667_length_463_cov_2.317949_g14368_i0 PRJNA437204 14667 463 2.317949 10.73210387 Fimicolochytrium jonesii 1396493 Fungi Fungi 128 7.26e-25   NTclustered gi|2432097581|ref|XM_053071233.1| 1396493 g14368 i0 82.313 4.21166306695464 147 26 32 0 273 419 229 83 Fimicolochytrium jonesii 30S ribosomal protein S30e (EV422DRAFT_541825), mRNA blastn 1950 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
10635926 10635926 PRJNA437204_P_NODE_129989_length_227_cov_2.298701_g129690_i0 PRJNA437204 129989 227 2.298701 5.21805127 Batrachochytrium dendrobatidis 109871 Fungi Fungi 161 3.22e-35   NTclustered gi|575484485|ref|XM_006681474.1| 684364 g129690 i0 86.806 3.6784140969163 144 19 63 0 70 213 198 55 Batrachochytrium dendrobatidis JAM81 ribosomal 60S subunit protein L39 (BATDEDRAFT_91214), partial mRNA blastn 835 161 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
14460839 14460839 PRJNA437204_P_NODE_13952_length_472_cov_1.385965_g13653_i0 PRJNA437204 13952 472 1.385965 6.5417548 Polychytrium aggregatum 110093 Fungi Fungi 261 7.01e-65   NTclustered gi|2432132805|ref|XM_053109589.1| 110093 g13653 i0 78.313 15.1419491525424 415 82 87 5 2 412 559 149 Polychytrium aggregatum 50S ribosomal protein L30e-like protein (BJ171DRAFT_490208), mRNA blastn 7147 261 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
20834014 20834014 PRJNA437204_P_NODE_28917_length_361_cov_1.336806_g28618_i0 PRJNA437204 28917 361 1.336806 4.82586966 Fimicolochytrium jonesii 1396493 Fungi Fungi 377 4.97e-100   NTclustered gi|2432052758|ref|XM_053073165.1| 1396493 g28618 i0 89.109 83.6592797783934 303 33 84 0 55 357 415 113 Fimicolochytrium jonesii ribosomal protein S12 (EV422DRAFT_572964), partial mRNA blastn 30201 377 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
22109315 22109315 PRJNA437204_P_NODE_47798_length_305_cov_1.461207_g47499_i0 PRJNA437204 47798 305 1.461207 4.45668135 Polychytrium aggregatum 110093 Fungi Fungi 185 2.6899999999999998e-42   NTclustered gi|2432132239|ref|XM_053109464.1| 110093 g47499 i0 80.478 5.2655737704918 251 41 81 7 46 292 560 314 Polychytrium aggregatum ribosomal protein S17-domain-containing protein (BJ171DRAFT_489270), mRNA blastn 1606 185 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
23384682 23384682 PRJNA437204_P_NODE_36419_length_334_cov_2.950192_g36120_i0 PRJNA437204 36419 334 2.950192 9.85364128 Polychytrium aggregatum 110093 Fungi Fungi 169 3e-37   NTclustered gi|2432169762|ref|XM_053112442.1| 110093 g36120 i0 85.987 28.8443113772455 157 22 47 0 12 168 77 233 Polychytrium aggregatum 60S ribosomal protein L39 (BJ171DRAFT_520507), mRNA blastn 9634 169 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;