RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA437204" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA437204 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6810479 6810479 PRJNA437204_P_NODE_49006_length_303_cov_0.904348_g48707_i0 PRJNA437204 49006 303 0.904348 2.74017444 Hirudo verbana 311461 Annelida Annelida 150 9.73e-32   NTclustered gi|2918369620|emb|OZ237782.1| 311461 g48707 i0 90.991 28.03300330033 111 10 37 0 9 119 7333206 7333316 Hirudo verbana genome assembly, chromosome: 4 blastn 8494 150 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
11911517 11911517 PRJNA437204_P_NODE_51730_length_297_cov_1.031250_g51431_i0 PRJNA437204 51730 297 1.03125 3.0628125 Ailoscolex lacteospumosus 1046305 Annelida Annelida 89.8 2.1e-13   NTclustered gi|2920003608|emb|OZ238872.1| 1046305 g51431 i0 81.481 6.20538720538721 108 20 38 0 178 285 4362290 4362397 Ailoscolex lacteospumosus genome assembly, chromosome: 13 blastn 1843 89.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
15736206 15736206 PRJNA437204_P_NODE_9153_length_557_cov_1.888430_g8855_i0 PRJNA437204 9153 557 1.88843 10.5185551 Arenicola marina 6344 Annelida Annelida 392 2.85e-104   NTclustered gi|2108986873|gb|MZ593354.1| 6344 g8855 i0 80.075 94.8599640933573 532 102 95 4 27 556 1471 942 Arenicola marina ATP synthase subunit beta, mitochondrial (ATPB) mRNA, partial cds; nuclear gene for mitochondrial product blastn 52837 392 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Arenicolidae Arenicola Arenicola marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;