RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA437204" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA437204 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10635441 10635441 PRJNA437204_P_NODE_103729_length_246_cov_0.890173_g103430_i0 PRJNA437204 103729 246 0.890173 2.18982558 Thecamonas trahens 529818 Root_unresolved Root_unresolved 176 1.26e-39   NTclustered gi|923130274|ref|XM_013903149.1| 461836 g103430 i0 88.356 44.719512195122 146 17 59 0 97 242 734 589 Thecamonas trahens ATCC 50062 14-3-3 family protein epsilon (AMSG_04940), partial mRNA blastn 11001 176 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
23385804 23385804 PRJNA437204_P_NODE_9519_length_549_cov_0.834034_g9221_i0 PRJNA437204 9519 549 0.834034 4.57884666 Thecamonas trahens 529818 Root_unresolved Root_unresolved 318 4.82e-82   NTclustered gi|923129698|ref|XM_013902861.1| 461836 g9221 i0 79.104 14.2677595628415 469 92 85 6 60 525 141 606 Thecamonas trahens ATCC 50062 acyl-coa dehydrogenase (AMSG_04641), partial mRNA blastn 7833 318 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;