contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA436017" and tax_phylum = "Euglenozoa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 431010 | 431010 | PRJNA436017_P_NODE_7881_length_315_cov_2.233813_g7584_i0 | PRJNA436017 | 7881 | 315 | 2.233813 | 7.03651095 | Diplonema papillatum | 91374 | Euglenozoa | other_Eukaryota | 433 | 9.01e-117 | NTclustered | gi|560190589|gb|KF633467.1| | 91374 | g7584 | i0 | 91.304 | 24.8507936507937 | 322 | 20 | 100 | 5 | 1 | 315 | 1849 | 1529 | Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence | blastn | 7828 | 433 | 1 | Eukaryota | Discoba | Euglenozoa | Diplonemea | Diplonemidae | Diplonema | Diplonema papillatum | |||
| 1705666 | 1705666 | PRJNA436017_P_NODE_23282_length_169_cov_1.431818_g22984_i0 | PRJNA436017 | 23282 | 169 | 1.431818 | 2.41977242 | Rhynchomonas nasuta | 127150 | Euglenozoa | other_Eukaryota | 283 | 4.6e-72 | NTclustered | gi|1996609220|gb|MW694339.1| | 127150 | g22984 | i0 | 97.041 | 95.3136094674556 | 169 | 4 | 100 | 1 | 1 | 169 | 801 | 634 | Rhynchomonas nasuta isolate G431 small subunit ribosomal RNA gene, partial sequence | blastn | 16108 | 283 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Neobodonida | Rhynchomonadidae | Rhynchomonas | Rhynchomonas nasuta | ||
| 1705869 | 1705869 | PRJNA436017_P_NODE_7162_length_333_cov_2.104730_g6865_i0 | PRJNA436017 | 7162 | 333 | 2.10473 | 7.0087509 | Lacrimia lanifica | 2016125 | Euglenozoa | other_Eukaryota | 104 | 8.54e-18 | NTclustered | gi|1802568038|gb|MN109014.1| | 2016125 | g6865 | i0 | 80 | 0.870870870870871 | 145 | 26 | 43 | 3 | 127 | 269 | 720 | 863 | Lacrimia lanifica clone U02 U02 array genomic sequence; and rnl gene, partial sequence; mitochondrial | blastn | 290 | 104 | 1 | Eukaryota | Discoba | Euglenozoa | Diplonemea | Diplonemidae | Lacrimia | Lacrimia lanifica | |||
| 2981677 | 2981677 | PRJNA436017_P_NODE_6383_length_354_cov_1.962145_g6087_i0 | PRJNA436017 | 6383 | 354 | 1.962145 | 6.9459933 | Diplonemida sp. | 2015511 | Euglenozoa | other_Eukaryota | 416 | 1.03e-111 | NTclustered | gi|1214280013|gb|MF422198.1| | 2015511 | g6087 | i0 | 88.022 | 74.5169491525424 | 359 | 34 | 100 | 9 | 1 | 354 | 1078 | 724 | Diplonemida sp. isolate YPF1523 small subunit ribosomal RNA gene, partial sequence | blastn | 26379 | 416 | 1 | Eukaryota | Discoba | Euglenozoa | Diplonemea | Diplonemida sp. | |||||
| 3640035 | 3640035 | PRJNA436017_P_NODE_13743_length_225_cov_5.638298_g13445_i0 | PRJNA436017 | 13743 | 225 | 5.638298 | 12.6861705 | Trypanosoma | 5690 | Euglenozoa | other_Eukaryota | 248 | 2.38e-61 | NTclustered | gi|556442|gb|L22334.1|TRBS3RRBN | 5693 | g13445 | i0 | 95.513 | 79.4088888888889 | 156 | 5 | 69 | 2 | 70 | 225 | 5329 | 5176 | Trypanosoma cruzi 5.8S ribosomal RNA, internal transcribed spacers 1-7 (ITS1-ITS7), and 28S ribosomal RNA | blastn | 17867 | 248 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma cruzi | ||
| 3640054 | 3640054 | PRJNA436017_P_NODE_16523_length_202_cov_12.539394_g16225_i0 | PRJNA436017 | 16523 | 202 | 12.539394 | 25.32957588 | Trypanosoma | 5690 | Euglenozoa | other_Eukaryota | 261 | 2.68e-65 | NTclustered | gi|162233|gb|M63699.1|TRBRGS1 | 5693 | g16225 | i0 | 90.099 | 89.950495049505 | 202 | 19 | 99 | 1 | 2 | 202 | 262 | 61 | T.cruzi S3 ribosomal RNA gene | blastn | 18170 | 261 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma cruzi | ||
| 5534750 | 5534750 | PRJNA436017_P_NODE_7865_length_315_cov_3.701439_g7568_i0 | PRJNA436017 | 7865 | 315 | 3.701439 | 11.65953285 | Diplonema papillatum | 91374 | Euglenozoa | other_Eukaryota | 427 | 4.1899999999999985e-115 | NTclustered | gi|560190589|gb|KF633467.1| | 91374 | g7568 | i0 | 91.139 | 40.615873015873 | 316 | 26 | 100 | 2 | 1 | 315 | 3132 | 3446 | Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence | blastn | 12794 | 427 | 1 | Eukaryota | Discoba | Euglenozoa | Diplonemea | Diplonemidae | Diplonema | Diplonema papillatum | |||
| 7467062 | 7467062 | PRJNA436017_P_NODE_12186_length_242_cov_60.229268_g11888_i0 | PRJNA436017 | 12186 | 242 | 60.229268 | 145.75482856 | Trypanosoma | 5690 | Euglenozoa | other_Eukaryota | 350 | 6.9e-92 | NTclustered | gi|162233|gb|M63699.1|TRBRGS1 | 5693 | g11888 | i0 | 95.455 | 114.194214876033 | 220 | 8 | 90 | 2 | 22 | 240 | 44 | 262 | T.cruzi S3 ribosomal RNA gene | blastn | 27635 | 350 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma cruzi | ||
| 8741867 | 8741867 | PRJNA436017_P_NODE_12187_length_242_cov_26.170732_g11889_i0 | PRJNA436017 | 12187 | 242 | 26.170732 | 63.33317144 | Trypanosoma | 5690 | Euglenozoa | other_Eukaryota | 300 | 7.05e-77 | NTclustered | gi|162233|gb|M63699.1|TRBRGS1 | 5693 | g11889 | i0 | 91.364 | 105.359504132231 | 220 | 18 | 91 | 1 | 22 | 241 | 44 | 262 | T.cruzi S3 ribosomal RNA gene | blastn | 25497 | 300 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma cruzi | ||
| 13184482 | 13184482 | PRJNA436017_P_NODE_23631_length_168_cov_1.160305_g23333_i0 | PRJNA436017 | 23631 | 168 | 1.160305 | 1.9493124 | Leishmania sp. Ghana 2012 LV757 | 2803181 | Euglenozoa | other_Eukaryota | 171 | 3.73e-38 | NTclustered | gi|2795000421|ref|XM_067846461.1| | 2803181 | g23333 | i0 | 93.103 | 28.5297619047619 | 116 | 8 | 69 | 0 | 1 | 116 | 278 | 393 | Leishmania sp. Ghana 2012 LV757 uncharacterized protein (GH5_06680), partial mRNA | blastn | 4793 | 171 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Leishmania | Leishmania sp. Ghana 2012 LV757 | ||
| 17666669 | 17666669 | PRJNA436017_P_NODE_22934_length_170_cov_2.067669_g22636_i0 | PRJNA436017 | 22934 | 170 | 2.067669 | 3.5150373 | Trypanosomatidae | 5654 | Euglenozoa | other_Eukaryota | 76.8 | 8.44e-10 | NTclustered | gi|169656123|gb|EU429363.1| | 5659 | g22636 | i0 | 95.745 | 25.6352941176471 | 47 | 2 | 28 | 0 | 124 | 170 | 435 | 389 | Leishmania amazonensis clone AR249 28S ribosomal RNA (LSU-beta)-like gene, partial sequence | blastn | 4358 | 76.8 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Leishmania | Leishmania amazonensis | ||
| 18282306 | 18282306 | PRJNA436017_P_NODE_16815_length_201_cov_0.926829_g16517_i0 | PRJNA436017 | 16815 | 201 | 0.926829 | 1.86292629 | Leptomonas pyrrhocoris | 157538 | Euglenozoa | other_Eukaryota | 82.4 | 2.23e-11 | NTclustered | gi|1002446348|ref|XM_015803961.1| | 157538 | g16517 | i0 | 92.982 | 3.54726368159204 | 57 | 2 | 28 | 2 | 118 | 173 | 60 | 5 | Leptomonas pyrrhocoris hypothetical protein mRNA | blastn | 713 | 82.4 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Leptomonas | Leptomonas pyrrhocoris | ||
| 18282662 | 18282662 | PRJNA436017_P_NODE_9455_length_282_cov_2.706122_g9157_i0 | PRJNA436017 | 9455 | 282 | 2.706122 | 7.63126404 | Lacrimia vacuolata | 3051248 | Euglenozoa | other_Eukaryota | 420 | 6.19e-113 | NTclustered | gi|2514496195|gb|OR094903.1| | 3051248 | g9157 | i0 | 93.617 | 72.3758865248227 | 282 | 17 | 100 | 1 | 1 | 282 | 120 | 400 | Lacrimia vacuolata isolate YPF1808 small subunit ribosomal RNA gene, partial sequence | blastn | 20410 | 420 | 1 | Eukaryota | Discoba | Euglenozoa | Diplonemea | Diplonemidae | Lacrimia | Lacrimia vacuolata | |||
| 21490905 | 21490905 | PRJNA436017_P_NODE_5017_length_407_cov_2.994595_g4721_i0 | PRJNA436017 | 5017 | 407 | 2.994595 | 12.18800165 | Trypanosomatidae | 5654 | Euglenozoa | other_Eukaryota | 348 | 4.45e-91 | NTclustered | gi|2414483|emb|Y00055.1| | 5656 | g4721 | i0 | 82.299 | 97.7346437346437 | 435 | 45 | 100 | 21 | 1 | 407 | 7503 | 7073 | Crithidia fasciculata ribosomal DNA repeat (complete) | blastn | 39778 | 348 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Crithidia | Crithidia fasciculata |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;