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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA436017" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA436017 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
430865 430865 PRJNA436017_P_NODE_27161_length_156_cov_6.252101_g26863_i0 PRJNA436017 27161 156 6.252101 9.75327756 Physoderma maydis 276838 Fungi Fungi 111 2.09e-20   NTclustered gi|626438334|ref|NR_119547.1| 276838 g26863 i0 86.408 63.525641025641 103 13 66 1 54 156 296 195 Physoderma maydis DUKE DUH0007932 ITS region; from reference material blastn 9910 111 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Physoderma Physoderma maydis
6808759 6808759 PRJNA436017_P_NODE_826_length_1014_cov_1.566018_g688_i0 PRJNA436017 826 1014 1.566018 15.87942252 Blastocladiella sp. 2169676 Fungi Fungi 601 8.14e-167   NTclustered gi|1976519919|gb|MN873040.1| 2169676 g688 i0 86.449 5.00986193293886 583 37 77 26 443 1005 23109 23669 Blastocladiella sp. mitochondrion, complete genome blastn 5080 601 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella sp.
9359099 9359099 PRJNA436017_P_NODE_7208_length_331_cov_4.176871_g6911_i0 PRJNA436017 7208 331 4.176871 13.82544301 Blastocladiella emersonii 4808 Fungi Fungi 178 4.929999999999999e-40   NTclustered gi|2440036|emb|X90411.1| 4808 g6911 i0 96.296 33.2809667673716 108 4 33 0 1 108 3269 3376 B.emersonii DNA for 28S ribosomal RNA gene blastn 11016 178 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
13842639 13842639 PRJNA436017_P_NODE_5851_length_371_cov_2.544910_g5555_i0 PRJNA436017 5851 371 2.54491 9.4416161 Catenariaceae 109872 Fungi Fungi 684 0   NTclustered gi|1866582799|gb|MT730974.1| 2420186 g5555 i0 100 98.0808625336927 370 0 99 0 2 371 4520 4151 Catenaria sp. isolate UM1556 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36388 684 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria sp.
14459491 14459491 PRJNA436017_P_NODE_15792_length_208_cov_1.333333_g15494_i0 PRJNA436017 15792 208 1.333333 2.77333264 Blastocladiella emersonii 4808 Fungi Fungi 303 4.56e-78   NTclustered gi|209427640|ref|NC_011360.1| 4808 g15494 i0 97.74 17.9567307692308 177 2 84 2 27 201 14518 14342 Blastocladiella emersonii mitochondrion, complete genome blastn 3735 303 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
19556457 19556457 PRJNA436017_P_NODE_10456_length_266_cov_1.995633_g10158_i0 PRJNA436017 10456 266 1.995633 5.30838378 Blastocladiella emersonii 4808 Fungi Fungi 440 4.439999999999998e-119   NTclustered gi|209427640|ref|NC_011360.1| 4808 g10158 i0 96.642 48.0601503759398 268 4 100 4 1 266 14880 15144 Blastocladiella emersonii mitochondrion, complete genome blastn 12784 440 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
19556493 19556493 PRJNA436017_P_NODE_12456_length_239_cov_2.257426_g12158_i0 PRJNA436017 12456 239 2.257426 5.39524814 Blastocladiella emersonii 4808 Fungi Fungi 316 6.9e-82   NTclustered gi|209427640|ref|NC_011360.1| 4808 g12158 i0 95.918 23.3179916317992 196 6 82 2 1 195 15333 15527 Blastocladiella emersonii mitochondrion, complete genome blastn 5573 316 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
24040900 24040900 PRJNA436017_P_NODE_7539_length_323_cov_3.853147_g7242_i0 PRJNA436017 7539 323 3.853147 12.44566481 Catenaria 109875 Fungi Fungi 592 1.4499999999999999e-164   NTclustered gi|321173773|gb|HQ888754.1| 945976 g7242 i0 99.69 67.5944272445821 323 1 100 0 1 323 377 699 Catenaria sp. JEL 339 28S ribosomal RNA gene, partial sequence blastn 21833 592 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria sp. JEL 339
24657005 24657005 PRJNA436017_P_NODE_16300_length_204_cov_1.802395_g16002_i0 PRJNA436017 16300 204 1.802395 3.6768858 Blastocladiella emersonii 4808 Fungi Fungi 220 4.61e-53   NTclustered gi|209427640|ref|NC_011360.1| 4808 g16002 i0 98.4 44.9950980392157 125 2 85 0 1 125 14543 14667 Blastocladiella emersonii mitochondrion, complete genome blastn 9179 220 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
24657156 24657156 PRJNA436017_P_NODE_24360_length_165_cov_1.765625_g24062_i0 PRJNA436017 24360 165 1.765625 2.91328125 Allomyces macrogynus 28583 Fungi Fungi 231 1.65e-56   NTclustered gi|11467573|ref|NC_001715.1| 28583 g24062 i0 93.082 24.5575757575758 159 9 96 2 7 165 1141 985 Allomyces macrogynus mitochondrion, complete genome blastn 4052 231 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;