RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA432257" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA432257 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2979740 2979740 PRJNA432257_S_NODE_114483_length_162_cov_1.160000_g114102_i0 PRJNA432257 114483 162 1.16 1.8792 Brachydistomum sp. PakPr2 2714095 Platyhelminthes Platyhelminthes 204 3.52e-48   NTclustered gi|1829660974|gb|MK685273.1| 2714095 g114102 i0 92.857 41.4506172839506 140 10 86 0 20 159 9297 9158 Brachydistomum sp. PakPr2 mitochondrion, partial genome blastn 6715 204 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Brachydistomum Brachydistomum sp. PakPr2
6808011 6808011 PRJNA432257_S_NODE_93466_length_181_cov_21.944444_g93085_i0 PRJNA432257 93466 181 21.944444 39.71944364 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 63.9 7.1e-6   NTclustered gi|687545731|emb|LK646609.1| 57078 g93085 i0 100 2.46961325966851 34 0 19 0 101 134 479 446 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_contig0024035 blastn 447 63.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
7466871 7466871 PRJNA432257_S_NODE_58646_length_217_cov_1088.166667_g58265_i0 PRJNA432257 58646 217 1088.166667 2361.32166739 Metazoa 33208 Platyhelminthes Platyhelminthes 52.8 0.019   NTclustered gi|2318773805|ref|XM_051217790.1| 6185 g58265 i0 100 0.258064516129032 28 0 13 0 108 135 2494 2467 Schistosoma haematobium Potassium voltage-gated channel sub C member 4 (KCNC4_2), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
16391249 16391249 PRJNA432257_S_NODE_35993_length_261_cov_34.415179_g35612_i0 PRJNA432257 35993 261 34.415179 89.82361719 Metazoa 33208 Platyhelminthes Platyhelminthes 52.8 0.024   NTclustered gi|2318773805|ref|XM_051217790.1| 6185 g35612 i0 100 0.21455938697318 28 0 11 0 152 179 2494 2467 Schistosoma haematobium Potassium voltage-gated channel sub C member 4 (KCNC4_2), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
17666306 17666306 PRJNA432257_S_NODE_3414_length_601_cov_2.939716_g3208_i0 PRJNA432257 3414 601 2.939716 17.66769316 Metazoa 33208 Platyhelminthes Platyhelminthes 1053 0   NTclustered gi|60687563|gb|AY914894.1| 6182 g3208 i0 99.482 95.8452579034942 579 3 96 0 23 601 8 586 Schistosoma japonicum unknown mRNA blastn 57603 1053 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
20832002 20832002 PRJNA432257_S_NODE_94617_length_180_cov_82.923077_g94236_i0 PRJNA432257 94617 180 82.923077 149.2615386 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 250 5.04e-62   NTclustered gi|56757963|gb|AY815390.1| 6182 g94236 i0 97.279 82.7111111111111 147 4 82 0 34 180 2378 2524 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 14888 250 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
24656069 24656069 PRJNA432257_S_NODE_47540_length_235_cov_16.010101_g47159_i0 PRJNA432257 47540 235 16.010101 37.62373735 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 52.8 0.021   NTclustered gi|1084312780|ref|XM_018793587.1| 6183 g47159 i0 100 0.119148936170213 28 0 12 0 160 187 872 899 Schistosoma mansoni cercarial elastase (S01 family) partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;