contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA432257" and tax_phylum = "Evosea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 430070 | 430070 | PRJNA432257_S_NODE_70881_length_202_cov_65.387879_g70500_i0 | PRJNA432257 | 70881 | 202 | 65.387879 | 132.08351558 | Dictyostelium discoideum | 44689 | Evosea | other_Eukaryota | 54.7 | 0.005 | NTclustered | gi|66824398|ref|XM_640462.1| | 352472 | g70500 | i0 | 100 | 0.143564356435644 | 29 | 0 | 14 | 0 | 77 | 105 | 2113 | 2085 | Dictyostelium discoideum AX4 hypothetical protein (DDB_G0271610) mRNA, complete cds | blastn | 29 | 54.7 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 1705090 | 1705090 | PRJNA432257_S_NODE_86482_length_187_cov_2.153333_g86101_i0 | PRJNA432257 | 86482 | 187 | 2.153333 | 4.02673271 | Cavenderia fasciculata | 261658 | Evosea | other_Eukaryota | 52.8 | 0.016 | NTclustered | gi|470252377|ref|XM_004359229.1| | 261658 | g86101 | i0 | 100 | 0.149732620320856 | 28 | 0 | 15 | 0 | 84 | 111 | 251 | 278 | Cavenderia fasciculata uncharacterized protein (DFA_01320), partial mRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia fasciculata | ||
| 10633335 | 10633335 | PRJNA432257_S_NODE_27089_length_289_cov_97.015873_g26708_i0 | PRJNA432257 | 27089 | 289 | 97.015873 | 280.37587297 | Protostelium mycophagum | 472931 | Evosea | other_Eukaryota | 385 | 2.32e-102 | NTclustered | gi|290886111|gb|GU477647.1| | 472931 | g26708 | i0 | 99.526 | 40.916955017301 | 211 | 1 | 73 | 0 | 79 | 289 | 151 | 361 | Protostelium mycophagum strain ATCC PRA-128 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence | blastn | 11825 | 385 | 1 | Eukaryota | Amoebozoa | Evosea | Variosea | Protosteliida | Protosteliaceae | Protostelium | Protostelium mycophagum | ||
| 11909156 | 11909156 | PRJNA432257_S_NODE_97770_length_178_cov_2.212766_g97389_i0 | PRJNA432257 | 97770 | 178 | 2.212766 | 3.93872348 | Mastigamoeba balamuthi | 108607 | Evosea | other_Eukaryota | 134 | 5.23e-27 | NTclustered | gi|13569594|gb|AF348478.1|AF348478 | 108607 | g97389 | i0 | 90.196 | 49.5786516853933 | 102 | 10 | 57 | 0 | 77 | 178 | 1517 | 1416 | Mastigamoeba balamuthi enolase (enol) gene, complete cds | blastn | 8825 | 134 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Mastigamoebidae | Mastigamoeba | Mastigamoeba balamuthi | |||
| 14458744 | 14458744 | PRJNA432257_S_NODE_59512_length_216_cov_155.173184_g59131_i0 | PRJNA432257 | 59512 | 216 | 155.173184 | 335.17407744 | Entamoeba nuttalli | 412467 | Evosea | other_Eukaryota | 56.5 | 0.001 | NTclustered | gi|672809539|ref|XM_008861586.1| | 1076696 | g59131 | i0 | 100 | 0.138888888888889 | 30 | 0 | 14 | 0 | 98 | 127 | 93 | 64 | Entamoeba nuttalli P19 hypothetical protein partial mRNA | blastn | 30 | 56.5 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba nuttalli | |||
| 17007315 | 17007315 | PRJNA432257_S_NODE_71114_length_202_cov_5.575758_g70733_i0 | PRJNA432257 | 71114 | 202 | 5.575758 | 11.26303116 | Protostelium mycophagum | 472931 | Evosea | other_Eukaryota | 374 | 3.3e-99 | NTclustered | gi|262262917|gb|FJ766460.1| | 472931 | g70733 | i0 | 100 | 31.5594059405941 | 202 | 0 | 100 | 0 | 1 | 202 | 1464 | 1263 | Protostelium mycophagum strain PRA-128 small subunit ribosomal RNA gene, partial sequence | blastn | 6375 | 374 | 1 | Eukaryota | Amoebozoa | Evosea | Variosea | Protosteliida | Protosteliaceae | Protostelium | Protostelium mycophagum | ||
| 17666252 | 17666252 | PRJNA432257_S_NODE_22554_length_309_cov_5.426471_g22173_i0 | PRJNA432257 | 22554 | 309 | 5.426471 | 16.76779539 | Dictyostelium | 5782 | Evosea | other_Eukaryota | 56.5 | 0.002 | NTclustered | gi|4731866|gb|AF098916.1|AF098916 | 44689 | g22173 | i0 | 100 | 10.3462783171521 | 30 | 0 | 10 | 0 | 225 | 254 | 135 | 106 | Dictyostelium discoideum sterol glucosyltransferase (ugt52) mRNA, complete cds | blastn | 3197 | 56.5 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 18940298 | 18940298 | PRJNA432257_S_NODE_58415_length_218_cov_2.607735_g58034_i0 | PRJNA432257 | 58415 | 218 | 2.607735 | 5.6848623 | Eumycetozoa | 142796 | Evosea | other_Eukaryota | 54.7 | 0.005 | NTclustered | gi|66801708|ref|XM_629777.1| | 352472 | g58034 | i0 | 96.875 | 0.678899082568807 | 32 | 1 | 15 | 0 | 127 | 158 | 2397 | 2428 | Dictyostelium discoideum AX4 hypothetical protein (DDB_G0292032) mRNA, complete cds | blastn | 148 | 54.7 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 20830974 | 20830974 | PRJNA432257_S_NODE_18217_length_332_cov_42.532203_g17836_i0 | PRJNA432257 | 18217 | 332 | 42.532203 | 141.20691396 | Dictyostelium purpureum | 5786 | Evosea | other_Eukaryota | 56.5 | 0.002 | NTclustered | gi|330798749|ref|XM_003287365.1| | 5786 | g17836 | i0 | 97.059 | 0.439759036144578 | 34 | 0 | 10 | 1 | 57 | 89 | 879 | 912 | Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_78270), partial mRNA | blastn | 146 | 56.5 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium purpureum |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;