RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA432257" and tax_phylum = "Duplornaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA432257 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2364342 2364342 PRJNA432257_S_NODE_92022_length_182_cov_73.082759_g91641_i0 PRJNA432257 92022 182 73.082759 133.01062138 Orbivirus 10892 Viruses Viruses 54.7 0.004   NTclustered gi|914339860|gb|KP821033.1| 35328 g91641 i0 100 8.6043956043956 29 0 16 0 45 73 1429 1457 Bluetongue virus 2 isolate SAD2001/03 segment 2, complete sequence blastn 1566 54.7 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus caerulinguae
2979880 2979880 PRJNA432257_S_NODE_1423_length_865_cov_7.925121_g1317_i0 PRJNA432257 1423 865 7.925121 68.55229665 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 1448 0   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g1317 i0 98.079 0.963005780346821 833 14 96 2 3 834 2641 1810 Malassezia restricta virus MrV40L, complete genome blastn 833 1448 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
5533608 5533608 PRJNA432257_S_NODE_59545_length_216_cov_114.217877_g59164_i0 PRJNA432257 59545 216 114.217877 246.71061432 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 56.5 0.001   NTclustered gi|2314496612|gb|ON791960.1| 28875 g59164 i0 100 13.5833333333333 30 0 14 0 153 182 1010 1039 Rotavirus A strain RVA/Human-wt/MWI/CHX11U/2019/G3P[8] NSP3 gene, complete cds blastn 2934 56.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
6808048 6808048 PRJNA432257_S_NODE_95926_length_179_cov_90.654930_g95545_i0 PRJNA432257 95926 179 90.65493 162.2723247 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 56.5 0.001   NTclustered gi|2314496612|gb|ON791960.1| 28875 g95545 i0 100 16.391061452514 30 0 17 0 35 64 1039 1010 Rotavirus A strain RVA/Human-wt/MWI/CHX11U/2019/G3P[8] NSP3 gene, complete cds blastn 2934 56.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
8083200 8083200 PRJNA432257_S_NODE_57887_length_219_cov_1.170330_g57506_i0 PRJNA432257 57887 219 1.17033 2.5630227 Coltivirus dermacentoris 3428066 Viruses Viruses 254 4.95e-63   NTclustered gi|2758887253|gb|PP473574.1| 46839 g57506 i0 90.674 4.37899543378995 193 15 88 3 15 206 4718 4528 MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence blastn 959 254 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Coltivirus Coltivirus dermacentoris
10634229 10634229 PRJNA432257_S_NODE_94589_length_180_cov_100.741259_g94208_i0 PRJNA432257 94589 180 100.741259 181.3342662 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 56.5 0.001   NTclustered gi|2314496612|gb|ON791960.1| 28875 g94208 i0 100 16.3 30 0 17 0 35 64 1039 1010 Rotavirus A strain RVA/Human-wt/MWI/CHX11U/2019/G3P[8] NSP3 gene, complete cds blastn 2934 56.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
14459086 14459086 PRJNA432257_S_NODE_85872_length_187_cov_146.646667_g85491_i0 PRJNA432257 85872 187 146.646667 274.22926729 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 56.5 0.001   NTclustered gi|2314496612|gb|ON791960.1| 28875 g85491 i0 100 15.6898395721925 30 0 16 0 124 153 1010 1039 Rotavirus A strain RVA/Human-wt/MWI/CHX11U/2019/G3P[8] NSP3 gene, complete cds blastn 2934 56.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
15732854 15732854 PRJNA432257_S_NODE_85793_length_187_cov_277.266667_g85412_i0 PRJNA432257 85793 187 277.266667 518.48866729 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 56.5 0.001   NTclustered gi|2314496612|gb|ON791960.1| 28875 g85412 i0 100 15.6898395721925 30 0 16 0 124 153 1010 1039 Rotavirus A strain RVA/Human-wt/MWI/CHX11U/2019/G3P[8] NSP3 gene, complete cds blastn 2934 56.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
19555905 19555905 PRJNA432257_S_NODE_67216_length_206_cov_149.609467_g66835_i0 PRJNA432257 67216 206 149.609467 308.19550202 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 56.5 0.001   NTclustered gi|2314496612|gb|ON791960.1| 28875 g66835 i0 100 14.2427184466019 30 0 15 0 143 172 1010 1039 Rotavirus A strain RVA/Human-wt/MWI/CHX11U/2019/G3P[8] NSP3 gene, complete cds blastn 2934 56.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis
20832057 20832057 PRJNA432257_S_NODE_99537_length_176_cov_301.935252_g99156_i0 PRJNA432257 99537 176 301.935252 531.40604352 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 237 3.82e-58   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g99156 i0 97.81 0.778409090909091 137 3 78 0 3 139 2641 2505 Malassezia restricta virus MrV40L, complete genome blastn 137 237 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
24655898 24655898 PRJNA432257_S_NODE_34800_length_264_cov_214.277533_g34419_i0 PRJNA432257 34800 264 214.277533 565.69268712 Rotavirus alphagastroenteritidis 3432193 Viruses Viruses 56.5 0.002   NTclustered gi|2314496612|gb|ON791960.1| 28875 g34419 i0 100 11.1136363636364 30 0 11 0 35 64 1039 1010 Rotavirus A strain RVA/Human-wt/MWI/CHX11U/2019/G3P[8] NSP3 gene, complete cds blastn 2934 56.5 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Rotavirus Rotavirus alphagastroenteritidis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;