RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA432257" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA432257 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13182797 13182797 PRJNA432257_S_NODE_112451_length_164_cov_1.212598_g112070_i0 PRJNA432257 112451 164 1.212598 1.98866072 Erythroparvovirus ungulate1 3052194 Viruses Viruses 292 7.41e-75   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g112070 i0 98.78 5 164 2 100 0 1 164 3843 3680 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 820 292 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
23381306 23381306 PRJNA432257_S_NODE_119179_length_157_cov_3.216667_g118798_i0 PRJNA432257 119179 157 3.216667 5.05016719 Parvoviridae sp. 1940570 Viruses Viruses 60.2 7.74e-5   NTclustered gi|2896100628|gb|PQ792202.1| 1940570 g118798 i0 91.111 0.573248407643312 45 2 28 2 80 123 3179 3136 MAG: Parvoviridae sp. isolate Sarthropod017_parvo2 genomic sequence blastn 90 60.2 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;