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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA432257" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA432257 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
428987 428987 PRJNA432257_S_NODE_105701_length_171_cov_1.917910_g105320_i0 PRJNA432257 105701 171 1.91791 3.2796261 Polychytrium aggregatum 110093 Fungi Fungi 183 4.869999999999999e-42   NTclustered gi|2432158512|ref|XM_053111712.1| 110093 g105320 i0 85.965 23.6666666666667 171 24 100 0 1 171 284 454 Polychytrium aggregatum 40S ribosomal protein S13 (BJ171DRAFT_513016), mRNA blastn 4047 183 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
1705071 1705071 PRJNA432257_S_NODE_84782_length_188_cov_114.483444_g84401_i0 PRJNA432257 84782 188 114.483444 215.22887472 uncultured Spizellomycetales 417325 Fungi Fungi 224 3.23e-54   NTclustered gi|1216360932|gb|MF483373.1| 417325 g84401 i0 97.692 46.3776595744681 130 3 69 0 24 153 368 239 Uncultured Spizellomycetales isolate soil 2163 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8719 224 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales     uncultured Spizellomycetales
5532860 5532860 PRJNA432257_S_NODE_121685_length_155_cov_2.313559_g121304_i0 PRJNA432257 121685 155 2.313559 3.58601645 Fimicolochytrium jonesii 1396493 Fungi Fungi 78.7 2.1e-10   NTclustered gi|2432100379|ref|XM_053071328.1| 1396493 g121304 i0 87.879 12.141935483871 66 8 43 0 90 155 378 313 Fimicolochytrium jonesii polyubiquitin 5 (EV422DRAFT_543342), mRNA blastn 1882 78.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
5532941 5532941 PRJNA432257_S_NODE_13665_length_367_cov_2.327273_g13284_i0 PRJNA432257 13665 367 2.327273 8.54109191 Chytridiaceae sp. 2012298 Fungi Fungi 409 1.8e-109   NTclustered gi|1866582671|gb|MT730846.1| 2012298 g13284 i0 87.465 97.4768392370572 359 39 97 6 1 356 4593 4948 Chytridiaceae sp. isolate JEL0844 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 35774 409 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae   Chytridiaceae sp.
8082598 8082598 PRJNA432257_S_NODE_1847_length_770_cov_54.537517_g1727_i0 PRJNA432257 1847 770 54.537517 419.9388809 Spizellomyces punctatus 109760 Fungi Fungi 71.3 2.13e-7   NTclustered gi|15147293|ref|NC_003052.1| 109760 g1727 i0 86.364 0.464935064935065 66 7 8 2 590 654 55848 55912 Spizellomyces punctatus mitochondrion chromosome 1, complete sequence blastn 358 71.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
10016799 10016799 PRJNA432257_S_NODE_26328_length_292_cov_68.282353_g25947_i0 PRJNA432257 26328 292 68.282353 199.38447076 Synchytrium 286114 Fungi Fungi 130 1.22e-25   NTclustered gi|2449511511|gb|OP142617.1| 286115 g25947 i0 84.444 46.2328767123288 135 18 46 3 9 142 11463 11331 Synchytrium endobioticum isolate SeTr-081-002 mitochondrion, complete genome blastn 13500 130 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium endobioticum
13183400 13183400 PRJNA432257_S_NODE_46111_length_238_cov_6.223881_g45730_i0 PRJNA432257 46111 238 6.223881 14.81283678 uncultured Mesochytriales 2170392 Fungi Fungi 368 1.87e-97   NTclustered gi|2465121815|gb|OQ687216.1| 2170392 g45730 i0 98.104 88.7142857142857 211 4 89 0 1 211 501 291 Uncultured Mesochytriales isolate UMPB-1935 small subunit ribosomal RNA gene, partial sequence blastn 21114 368 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Mesochytriales     uncultured Mesochytriales
13184065 13184065 PRJNA432257_S_NODE_971_length_1055_cov_3.685658_g901_i0 PRJNA432257 971 1055 3.685658 38.8836919 Polychytrium aggregatum 110093 Fungi Fungi 459 5.4e-124   NTclustered gi|2432157894|ref|XM_053108463.1| 110093 g901 i0 77.575 57.163981042654 767 166 72 6 292 1055 943 180 Polychytrium aggregatum ribosomal protein L4 domain-containing protein (BJ171DRAFT_461012), mRNA blastn 60308 459 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
14458254 14458254 PRJNA432257_S_NODE_2492_length_683_cov_104.439628_g2336_i0 PRJNA432257 2492 683 104.439628 713.32265924 Polychytrium aggregatum 110093 Fungi Fungi 272 4.8e-68   NTclustered gi|2432142218|ref|XM_053114797.1| 110093 g2336 i0 78.009 59.0614934114202 432 95 63 0 82 513 70 501 Polychytrium aggregatum ribosomal protein S13/S18-domain-containing protein (BJ171DRAFT_597985), partial mRNA blastn 40339 272 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
24655586 24655586 PRJNA432257_S_NODE_14500_length_359_cov_9.121118_g14119_i0 PRJNA432257 14500 359 9.121118 32.74481362 Fimicolochytrium jonesii 1396493 Fungi Fungi 291 6.62e-74   NTclustered gi|2432072949|ref|XM_053073468.1| 1396493 g14119 i0 86.873 41.7353760445682 259 34 72 0 3 261 430 688 Fimicolochytrium jonesii ubiquitin-related domain-containing protein (EV422DRAFT_586682), mRNA blastn 14983 291 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;