RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA432257" and tax_clade = "Metamonada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA432257 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17006720 17006720 PRJNA432257_S_NODE_25234_length_297_cov_2.919231_g24853_i0 PRJNA432257 25234 297 2.919231 8.67011607 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.008   NTclustered gi|2794976041|ref|XM_067865271.1| 2049356 g24853 i0 100 0.0976430976430976 29 0 10 0 163 191 11928 11900 Monocercomonoides exilis putative Serine/threonine-protein kinase TIO (MONOS_12636), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
24656074 24656074 PRJNA432257_S_NODE_47920_length_234_cov_279.659898_g47539_i0 PRJNA432257 47920 234 279.659898 654.40416132 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.002   NTclustered gi|2794960655|ref|XM_067874904.1| 2049356 g47539 i0 92.5 1.27777777777778 40 2 17 1 13 51 1006 967 Monocercomonoides exilis putative phosphatidylinositol glycan, class W protein (MONOS_4804), partial mRNA blastn 299 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;