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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA432257" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 14 ✖

bioproject 1

  • PRJNA432257 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1703948 1703948 PRJNA432257_S_NODE_114522_length_162_cov_0.936000_g114141_i0 PRJNA432257 114522 162 0.936 1.51632 Trachelomonas volvocina 103340 Euglenozoa other_Eukaryota 52.8 0.013   NTclustered gi|836614780|ref|NC_027288.1| 103340 g114141 i0 100 0.172839506172839 28 0 17 0 111 138 71482 71455 Trachelomonas volvocina strain UTEX 1327 chloroplast, complete genome blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas volvocina
9357722 9357722 PRJNA432257_S_NODE_39208_length_253_cov_4.217593_g38827_i0 PRJNA432257 39208 253 4.217593 10.67051029 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 52.8 0.023   NTclustered gi|2031940106|emb|OD957682.1| 5763 g38827 i0 90.244 0.162055335968379 41 3 16 1 22 62 9433 9394 Naegleria fowleri Karachi_NF001 strain blastn 41 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
9358071 9358071 PRJNA432257_S_NODE_63168_length_212_cov_1.194286_g62787_i0 PRJNA432257 63168 212 1.194286 2.53188632 Trypanosoma congolense 5692 Euglenozoa other_Eukaryota 58.4 4.01e-4   NTclustered gi|342183762|emb|HE575323.1| 1068625 g62787 i0 83.099 0.33490566037735803 71 5 32 6 1 68 1176924 1176990 Trypanosoma congolense IL3000 annotated genomic contig, chromosome 10 blastn 71 58.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
11908738 11908738 PRJNA432257_S_NODE_65110_length_209_cov_9.093023_g64729_i0 PRJNA432257 65110 209 9.093023 19.00441807 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.018   NTclustered gi|2119416215|ref|XM_044699845.1| 51637 g64729 i0 94.118 0.162679425837321 34 2 16 0 19 52 194 227 Naegleria lovaniensis uncharacterized protein (C9374_009636), partial mRNA blastn 34 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
13182743 13182743 PRJNA432257_S_NODE_107331_length_169_cov_2.643939_g106950_i0 PRJNA432257 107331 169 2.643939 4.46825691 Reclinomonas americana 48483 Root_unresolved Root_unresolved 113 6.3800000000000005e-21   NTclustered gi|462269660|gb|KC353357.1| 1295594 g106950 i0 84.615 70.6213017751479 117 14 68 3 31 145 2027 1913 Reclinomonas americana ATCC 50283 mitochondrion, complete genome blastn 11935 113 1 Eukaryota Discoba       Jakobida Histionidae Reclinomonas Reclinomonas americana
14458970 14458970 PRJNA432257_S_NODE_76992_length_196_cov_1.955975_g76611_i0 PRJNA432257 76992 196 1.955975 3.833711 Trypanosoma congolense 5692 Euglenozoa other_Eukaryota 76.8 1.01e-9   NTclustered gi|342185138|emb|HE575324.1| 1068625 g76611 i0 86.957 1.87244897959184 69 7 34 2 129 195 4576155 4576223 Trypanosoma congolense IL3000 annotated genomic contig, chromosome 11 blastn 367 76.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
15732343 15732343 PRJNA432257_S_NODE_46073_length_238_cov_10.587065_g45692_i0 PRJNA432257 46073 238 10.587065 25.1972147 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 89.8 1.63e-13   NTclustered gi|2119426825|ref|XM_044701175.1| 5763 g45692 i0 83.333 0.80672268907563 96 16 40 0 74 169 442 537 Naegleria fowleri uncharacterized protein (FDP41_010834), partial mRNA blastn 192 89.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
15732970 15732970 PRJNA432257_S_NODE_94713_length_180_cov_33.286713_g94332_i0 PRJNA432257 94713 180 33.286713 59.9160834 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 58.4 3.28e-4   NTclustered gi|1031970258|gb|CP015692.1| 85057 g94332 i0 90.909 0.244444444444444 44 3 24 1 26 69 528689 528647 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI42, partial sequence blastn 44 58.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
17666198 17666198 PRJNA432257_S_NODE_123634_length_154_cov_0.974359_g123253_i0 PRJNA432257 123634 154 0.974359 1.50051286 Trypanosoma 5690 Euglenozoa other_Eukaryota 248 1.5e-61   NTclustered gi|62175522|gb|AC159414.1| 5691 g123253 i0 96.053 147.357142857143 152 6 99 0 3 154 65010 65161 Trypanosoma brucei chromosome 3 clone RPCI93-25B21, complete sequence blastn 22693 248 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
18280863 18280863 PRJNA432257_S_NODE_15475_length_351_cov_12.130573_g15094_i0 PRJNA432257 15475 351 12.130573 42.57831123 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 54.7 0.009   NTclustered gi|2119443025|ref|XM_044704881.1| 5763 g15094 i0 100 0.165242165242165 29 0 8 0 44 72 150 178 Naegleria fowleri uncharacterized protein (FDP41_001761), partial mRNA blastn 58 54.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
20831238 20831238 PRJNA432257_S_NODE_35337_length_263_cov_4.265487_g34956_i0 PRJNA432257 35337 263 4.265487 11.21823081 Trypanosoma congolense 5692 Euglenozoa other_Eukaryota 52.8 0.024   NTclustered gi|342183762|emb|HE575323.1| 1068625 g34956 i0 100 0.106463878326996 28 0 11 0 206 233 557227 557254 Trypanosoma congolense IL3000 annotated genomic contig, chromosome 10 blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
22105516 22105516 PRJNA432257_S_NODE_101798_length_175_cov_1.181159_g101417_i0 PRJNA432257 101798 175 1.181159 2.06702825 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 56.5 0.001   NTclustered gi|1624748415|ref|XM_029025136.1| 67003 g101417 i0 94.444 0.205714285714286 36 2 21 0 4 39 1332 1297 Trypanosoma theileri vacuolar protein sorting-associated protein 35 (TM35_000121610), partial mRNA blastn 36 56.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
22105673 22105673 PRJNA432257_S_NODE_115958_length_160_cov_2.398374_g115577_i0 PRJNA432257 115958 160 2.398374 3.8373984 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 52.8 0.013   NTclustered gi|1031970242|gb|CP015676.1| 85057 g115577 i0 96.875 0.2 32 0 19 1 7 37 182617 182586 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI26, partial sequence blastn 32 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
22106983 22106983 PRJNA432257_S_NODE_98098_length_178_cov_1.375887_g97717_i0 PRJNA432257 98098 178 1.375887 2.44907886 Seculamonas ecuadoriensis 221724 Root_unresolved Root_unresolved 76.8 8.94e-10   NTclustered gi|2443276717|gb|OP760443.1| 221724 g97717 i0 91.071 0.51123595505618 56 5 31 0 85 140 37 92 Seculamonas ecuadoriensis proliferating cell nuclear antigen PCNA mRNA, complete cds blastn 91 76.8 1 Eukaryota Discoba       Jakobida   Seculamonas Seculamonas ecuadoriensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;