RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA431371" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA431371 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15730569 15730569 PRJNA431371_P_NODE_11633_length_369_cov_1.040541_g11560_i0 PRJNA431371 11633 369 1.040541 3.83959629 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 52.8 0.035   NTclustered gi|2196304019|gb|MZ679022.1| 3003959 g11560 i0 100 0.0758807588075881 28 0 8 0 97 124 9052 9025 MAG: Picornavirales sp. isolate s42-k141_668395 putative polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
19554473 19554473 PRJNA431371_P_NODE_7856_length_440_cov_1.643052_g7783_i0 PRJNA431371 7856 440 1.643052 7.2294288 Coltivirus dermacentoris 3428066 Viruses Viruses 664 0   NTclustered gi|2758887253|gb|PP473574.1| 46839 g7783 i0 93.864 94.9340909090909 440 27 100 0 1 440 5051 4612 MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence blastn 41771 664 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Coltivirus Coltivirus dermacentoris
23380421 23380421 PRJNA431371_P_NODE_26959_length_249_cov_0.875000_g26886_i0 PRJNA431371 26959 249 0.875 2.17875 Alternaria tenuissima narnavirus 1 2587531 Viruses Viruses 52.8 0.023   NTclustered gi|1682807555|gb|MK584836.1| 2587531 g26886 i0 100 0.224899598393574 28 0 11 0 1 28 2498 2471 MAG: Alternaria tenuissima narnavirus 1 isolate CREA-VE-4AS3, complete sequence blastn 56 52.8 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Alternaria tenuissima narnavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;