RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA431371" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA431371 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
427939 427939 PRJNA431371_P_NODE_11481_length_371_cov_1.046980_g11408_i0 PRJNA431371 11481 371 1.04698 3.8842958 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 5.86e-5   NTclustered gi|2794962576|ref|XM_067873669.1| 2049356 g11408 i0 100 4.21832884097035 33 0 9 0 37 69 9961 9993 Monocercomonoides exilis uncharacterized protein (MONOS_3655), partial mRNA blastn 1565 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
19554115 19554115 PRJNA431371_P_NODE_2416_length_696_cov_1.730337_g2343_i0 PRJNA431371 2416 696 1.730337 12.04314552 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.019   NTclustered gi|2794952320|ref|XM_067877861.1| 2049356 g2343 i0 96.97 0.0474137931034483 33 0 5 1 243 275 1007 1038 Monocercomonoides exilis uncharacterized protein (MONOS_7528), mRNA blastn 33 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;