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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA431371" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA431371 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1702973 1702973 PRJNA431371_P_NODE_18282_length_300_cov_0.995595_g18209_i0 PRJNA431371 18282 300 0.995595 2.986785 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.028   NTclustered gi|470525710|ref|XM_004356591.1| 1257118 g18209 i0 90.244 0.136666666666667 41 2 13 2 223 261 3262 3222 Acanthamoeba castellanii str. Neff Ankyrin repeatcontaining protein (ACA1_174020), partial mRNA blastn 41 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1703328 1703328 PRJNA431371_P_NODE_3602_length_604_cov_1.775895_g3529_i0 PRJNA431371 3602 604 1.775895 10.7264058 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 634 4.669999999999999e-177   NTclustered gi|470385745|ref|XM_004334098.1| 1257118 g3529 i0 85.596 97.3692052980132 604 87 100 0 1 604 2261 1658 Acanthamoeba castellanii str. Neff helicase conserved Cterminal domain containing protein (ACA1_140170), partial mRNA blastn 58811 634 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6806314 6806314 PRJNA431371_P_NODE_8946_length_415_cov_2.207602_g8873_i0 PRJNA431371 8946 415 2.207602 9.1615483 Telaepolella tubasferens 1346289 Evosea other_Eukaryota 494 5.52e-135   NTclustered gi|167859711|gb|EU273435.1| 1346289 g8873 i0 88.509 97.4650602409639 409 45 98 2 8 415 791 384 Telaepolella tubasferens clone 1 actin gene, partial cds blastn 40448 494 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Telaepolella Telaepolella tubasferens
9356168 9356168 PRJNA431371_P_NODE_14148_length_338_cov_1.743396_g14075_i0 PRJNA431371 14148 338 1.743396 5.89267848 Heterostelium album 2086695 Evosea other_Eukaryota 268 2.9099999999999994e-67   NTclustered gi|1160570376|ref|XM_020574682.1| 670386 g14075 i0 82.637 84.8520710059172 311 47 91 5 1 306 425 117 Polysphondylium pallidum PN500 histone H3 partial mRNA blastn 28680 268 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
9356189 9356189 PRJNA431371_P_NODE_148_length_1686_cov_16.721017_g117_i0 PRJNA431371 148 1686 16.721017 281.91634662 Balamuthia mandrillaris 66527 Discosea other_Eukaryota 145 2.78e-29   NTclustered gi|2241228763|gb|OM994889.1| 66527 g117 i0 78.059 6.49525504151839 237 47 14 5 20 255 36754 36522 Balamuthia mandrillaris strain KM-20 mitochondrion, complete genome blastn 10951 145 1 Eukaryota Amoebozoa   Discosea   Longamoebia Balamuthiidae Balamuthia Balamuthia mandrillaris
11291158 11291158 PRJNA431371_P_NODE_16869_length_312_cov_2.707113_g16796_i0 PRJNA431371 16869 312 2.707113 8.44619256 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.4 6.27e-4   NTclustered gi|330791506|ref|XM_003283786.1| 5786 g16796 i0 92.5 1.58653846153846 40 3 13 0 31 70 6327 6288 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_45096), partial mRNA blastn 495 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
11906899 11906899 PRJNA431371_P_NODE_20670_length_281_cov_1.110577_g20597_i0 PRJNA431371 20670 281 1.110577 3.12072137 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.026   NTclustered gi|470439653|ref|XM_004339166.1| 1257118 g20597 i0 100 0.099644128113879 28 0 10 0 1 28 909 882 Acanthamoeba castellanii str. Neff leucine rich repeat domain containing protein (ACA1_058570), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15730909 15730909 PRJNA431371_P_NODE_27853_length_248_cov_2.965714_g27780_i0 PRJNA431371 27853 248 2.965714 7.35497072 Cavenderia fasciculata 261658 Evosea other_Eukaryota 87.9 6.15e-13   NTclustered gi|470236159|ref|XM_004349983.1| 261658 g27780 i0 91.935 0.25 62 5 25 0 1 62 62 1 Cavenderia fasciculata uncharacterized protein (DFA_11090), partial mRNA blastn 62 87.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
17005277 17005277 PRJNA431371_P_NODE_14094_length_339_cov_1.157895_g14021_i0 PRJNA431371 14094 339 1.157895 3.92526405 Paravannella minima 1443144 Discosea other_Eukaryota 119 3.11e-22   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g14021 i0 77.13 1.48672566371681 223 40 64 8 98 315 32113 31897 Paravannella minima mitochondrion, complete genome blastn 504 119 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
18279482 18279482 PRJNA431371_P_NODE_10975_length_378_cov_1.514754_g10902_i0 PRJNA431371 10975 378 1.514754 5.72577012 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 182 4.4e-41   NTclustered gi|470530395|ref|XM_004368186.1| 1257118 g10902 i0 79.389 0.992063492063492 262 50 69 4 47 306 456 197 Acanthamoeba castellanii str. Neff ureidopropionase, beta, putative (ACA1_295740), partial mRNA blastn 375 182 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20829857 20829857 PRJNA431371_P_NODE_22937_length_264_cov_1.612565_g22864_i0 PRJNA431371 22937 264 1.612565 4.2571716 Dictyostelium purpureum 5786 Evosea other_Eukaryota 233 8.02e-57   NTclustered gi|330842539|ref|XM_003293186.1| 5786 g22864 i0 82.707 53.9015151515151 266 42 100 4 1 264 182 445 Dictyostelium purpureum calmodulin (DICPUDRAFT_93011), mRNA blastn 14230 233 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
23380438 23380438 PRJNA431371_P_NODE_2799_length_662_cov_1.359932_g2726_i0 PRJNA431371 2799 662 1.359932 9.00274984 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 966 0   NTclustered gi|659103927|gb|KJ569727.1| 1512276 g2726 i0 93.373 58.0181268882175 664 27 98 11 16 662 1373 2036 Cochliopodium kieliense clone 9611 18S ribosomal RNA gene, partial sequence blastn 38408 966 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;