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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA429937" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 8 ✖

bioproject 1

  • PRJNA429937 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4254121 4254121 PRJNA429937_P_NODE_65184_length_423_cov_3.271574_g26173_i1 PRJNA429937 65184 423 3.271574 13.83875802 Acidianus brierleyi 41673 Archaea Archaea 52.8 0.041   NTclustered gi|1820310180|gb|CP029289.2| 41673 g26173 i1 100 0.066193853427896 28 0 7 0 395 422 833643 833670 Acidianus brierleyi strain DSM 1651 chromosome, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Acidianus Acidianus brierleyi
5530179 5530179 PRJNA429937_P_NODE_31305_length_650_cov_2.834138_g19109_i0 PRJNA429937 31305 650 2.834138 18.421897 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 1053 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g19109 i0 99.314 0.987692307692308 583 2 98 2 1 581 2820740 2820158 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 642 1053 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
9354629 9354629 PRJNA429937_P_NODE_31308_length_650_cov_2.732689_g19109_i1 PRJNA429937 31308 650 2.732689 17.7624785 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 1053 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g19109 i1 99.314 0.987692307692308 583 2 98 2 1 581 2820740 2820158 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 642 1053 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
10629543 10629543 PRJNA429937_P_NODE_113529_length_265_cov_3.012712_g90906_i0 PRJNA429937 113529 265 3.012712 7.9836868 Haloarcula regularis 3033392 Archaea Archaea 198 2.94e-46   NTclustered gi|2463595546|gb|CP119795.1| 3033392 g90906 i0 88.485 0.9660377358490572 165 17 96 2 102 265 99853 99690 Haloarcula regularis strain SYNS111 plasmid unnamed1, complete sequence blastn 256 198 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula regularis
11905897 11905897 PRJNA429937_P_NODE_62550_length_435_cov_3.105911_g42350_i0 PRJNA429937 62550 435 3.105911 13.510712850000001 Haloarcula regularis 3033392 Archaea Archaea 298 4.89e-76   NTclustered gi|2463595546|gb|CP119795.1| 3033392 g42350 i0 85.763 1.59080459770115 295 26 65 9 154 435 99562 99853 Haloarcula regularis strain SYNS111 plasmid unnamed1, complete sequence blastn 692 298 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula regularis
11906008 11906008 PRJNA429937_P_NODE_69010_length_407_cov_2.304233_g47626_i0 PRJNA429937 69010 407 2.304233 9.37822831 Haloarcula regularis 3033392 Archaea Archaea 198 4.74e-46   NTclustered gi|2463595546|gb|CP119795.1| 3033392 g47626 i0 88.485 0.734643734643735 165 17 73 2 1 164 99690 99853 Haloarcula regularis strain SYNS111 plasmid unnamed1, complete sequence blastn 299 198 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula regularis
15730307 15730307 PRJNA429937_P_NODE_93833_length_321_cov_2.071918_g71243_i0 PRJNA429937 93833 321 2.071918 6.65085678 Methanobacterium sp. MB1 1379702 Archaea Archaea 448 3.289999999999999e-121   NTclustered gi|557945513|emb|HG425166.1| 1379702 g71243 i0 99.197 7.08722741433022 249 0 98 2 9 255 743204 742956 Methanobacterium sp. MB1 complete sequence blastn 2275 448 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. MB1
24653019 24653019 PRJNA429937_P_NODE_42300_length_552_cov_3.936902_g26907_i0 PRJNA429937 42300 552 3.936902 21.73169904 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 477 7.56e-130   NTclustered gi|2388573995|gb|CP113312.1| 2032688 g26907 i0 88.776 0.710144927536232 392 40 71 4 163 552 14392 14781 MAG: Candidatus Methanoperedens sp. isolate v3 plasmid unnamed blastn 392 477 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;