RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA429937" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA429937 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6803450 6803450 PRJNA429937_P_NODE_118606_length_252_cov_2.219731_g95980_i0 PRJNA429937 118606 252 2.219731 5.59372212 Entomophaga aulicae 39303 Fungi Fungi 63.9 1.06e-5   NTclustered gi|1373048|gb|U35394.1|EAU35394 39303 g95980 i0 93.182 0.174603174603175 44 2 17 1 66 108 6017 6060 Entomophaga aulicae 18S, ITS-1, 5.8S, ITS-2, and 25S ribosomal RNA genes blastn 44 63.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophaga Entomophaga aulicae
18277524 18277524 PRJNA429937_P_NODE_135355_length_213_cov_26.445652_g112728_i0 PRJNA429937 135355 213 26.445652 56.32923876 Entomophthora culicis 181049 Fungi Fungi 241 3.7300000000000004e-59   NTclustered gi|20385355|gb|AF368516.1| 181049 g112728 i0 97.857 65.7276995305164 140 1 65 2 76 213 1858 1719 Entomophthora culicis small subunit ribosomal RNA gene, partial sequence blastn 14000 241 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora culicis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;