RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA429937" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA429937 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8740328 8740328 PRJNA429937_P_NODE_26087_length_717_cov_1408.433140_g15632_i0 PRJNA429937 26087 717 1408.43314 10098.4656138 Adineta 104781 Rotifera other_Eukaryota 1107 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g15632 i0 95.677 41.7196652719665 694 20 96 9 7 694 2190 1501 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 29913 1118 0.990161001788909 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
9355746 9355746 PRJNA429937_P_NODE_89568_length_334_cov_180.180328_g66996_i0 PRJNA429937 89568 334 180.180328 601.80229552 Brachionus patulus 160652 Rotifera other_Eukaryota 490 5.629999999999998e-134   NTclustered gi|61200806|gb|AY829084.1| 160652 g66996 i0 94.904 91.8353293413174 314 15 94 1 1 313 1748 1435 Brachionus patulus 28S ribosomal RNA gene, partial sequence blastn 30673 490 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus patulus
11290669 11290669 PRJNA429937_P_NODE_25889_length_720_cov_1714.082489_g15499_i0 PRJNA429937 25889 720 1714.082489 12341.3939208 Eurotatoria 2816136 Rotifera other_Eukaryota 1179 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g15499 i0 97.54 39.9444444444444 691 13 96 3 24 711 1501 2190 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 28760 1179 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;