contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJNA429937" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1700791 | 1700791 | PRJNA429937_P_NODE_140142_length_205_cov_2.636364_g117515_i0 | PRJNA429937 | 140142 | 205 | 2.636364 | 5.4045462 | Nitrospira defluvii | 330214 | Bacteria | Bacteria | 187 | 4.6999999999999985e-43 | NTclustered | gi|300603458|emb|FP929003.1| | 330214 | g117515 | i0 | 96.46 | 1.02926829268293 | 113 | 4 | 100 | 0 | 1 | 113 | 1325806 | 1325918 | Candidatus Nitrospira defluvii chromosome, complete genome | blastn | 211 | 187 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira defluvii | ||
| 1701065 | 1701065 | PRJNA429937_P_NODE_21082_length_801_cov_14.480570_g12470_i0 | PRJNA429937 | 21082 | 801 | 14.48057 | 115.9893657 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 898 | 0 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g12470 | i0 | 87.859 | 8.27965043695381 | 766 | 92 | 96 | 1 | 20 | 785 | 3238364 | 3237600 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 6632 | 898 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 1701092 | 1701092 | PRJNA429937_P_NODE_22002_length_784_cov_24.170861_g13058_i0 | PRJNA429937 | 22002 | 784 | 24.170861 | 189.49955024 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 590 | 1.3499999999999998e-163 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g13058 | i0 | 84.124 | 0.779336734693878 | 611 | 95 | 78 | 2 | 23 | 631 | 1126273 | 1126883 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 611 | 590 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 1701096 | 1701096 | PRJNA429937_P_NODE_22182_length_781_cov_3.510638_g13176_i0 | PRJNA429937 | 22182 | 781 | 3.510638 | 27.41808278 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 614 | 7.969999999999998e-171 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g13176 | i0 | 85.354 | 1.01024327784891 | 594 | 85 | 80 | 2 | 171 | 763 | 2078282 | 2077690 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 789 | 614 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 1701849 | 1701849 | PRJNA429937_P_NODE_56722_length_463_cov_14.271889_g37802_i0 | PRJNA429937 | 56722 | 463 | 14.271889 | 66.07884607 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 632 | 1.2599999999999996e-176 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g37802 | i0 | 96.354 | 81.3131749460043 | 384 | 14 | 83 | 0 | 2 | 385 | 201355 | 201738 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 37648 | 632 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 2976363 | 2976363 | PRJNA429937_P_NODE_115283_length_260_cov_4.722944_g92657_i0 | PRJNA429937 | 115283 | 260 | 4.722944 | 12.2796544 | Nitrospira tepida | 2973512 | Bacteria | Bacteria | 193 | 1.34e-44 | NTclustered | gi|2526808154|emb|OX365700.1| | 2973512 | g92657 | i0 | 81.513 | 0.915384615384615 | 238 | 41 | 91 | 3 | 24 | 259 | 333361 | 333125 | Nitrospira sp. DNF genome assembly, chromosome: NsDNF | blastn | 238 | 193 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira tepida | ||
| 4252888 | 4252888 | PRJNA429937_P_NODE_138724_length_207_cov_92.056180_g116097_i0 | PRJNA429937 | 138724 | 207 | 92.05618 | 190.5562926 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 342 | 9.599999999999999e-90 | NTclustered | gi|2863125063|dbj|AP038805.1| | 70125 | g116097 | i0 | 98.953 | 162.951690821256 | 191 | 2 | 92 | 0 | 1 | 191 | 2094005 | 2094195 | MAG: Nitrospira sp. AFB01 DNA, complete genome | blastn | 33731 | 342 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 4253713 | 4253713 | PRJNA429937_P_NODE_43324_length_545_cov_2.298450_g27672_i0 | PRJNA429937 | 43324 | 545 | 2.29845 | 12.5265525 | Candidatus Nitrospira inopinata | 1715989 | Bacteria | Bacteria | 163 | 2.37e-35 | NTclustered | gi|952974062|emb|LN885086.1| | 1715989 | g27672 | i0 | 90.323 | 0.607339449541284 | 124 | 12 | 23 | 0 | 422 | 545 | 2124014 | 2124137 | Nitrospira sp. ENR4 genome assembly NiCh1, chromosome : 1 | blastn | 331 | 163 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira inopinata | ||
| 6803260 | 6803260 | PRJNA429937_P_NODE_10426_length_1122_cov_3.763038_g5815_i1 | PRJNA429937 | 10426 | 1122 | 3.763038 | 42.22128636 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 311 | 1.71e-79 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g5815 | i1 | 84.79 | 0.275401069518717 | 309 | 47 | 28 | 0 | 291 | 599 | 2197830 | 2197522 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 309 | 311 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 8079803 | 8079803 | PRJNA429937_P_NODE_32187_length_640_cov_5.178396_g17314_i1 | PRJNA429937 | 32187 | 640 | 5.178396 | 33.1417344 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 632 | 1.7899999999999997e-176 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g17314 | i1 | 87.143 | 8.7859375 | 560 | 68 | 87 | 4 | 62 | 618 | 3197046 | 3197604 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 5623 | 632 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 9353649 | 9353649 | PRJNA429937_P_NODE_104388_length_289_cov_5.857692_g81770_i0 | PRJNA429937 | 104388 | 289 | 5.857692 | 16.92872988 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 422 | 1.77e-113 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g81770 | i0 | 93.056 | 279.543252595156 | 288 | 20 | 99 | 0 | 2 | 289 | 1277504 | 1277791 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 80788 | 422 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 9354798 | 9354798 | PRJNA429937_P_NODE_39088_length_577_cov_3.529197_g24624_i0 | PRJNA429937 | 39088 | 577 | 3.529197 | 20.36346669 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 569 | 1.2699999999999997e-157 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g24624 | i0 | 89.686 | 0.974003466204506 | 446 | 46 | 77 | 0 | 19 | 464 | 2001735 | 2002180 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 562 | 569 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 10631504 | 10631504 | PRJNA429937_P_NODE_92709_length_324_cov_5.013559_g70123_i0 | PRJNA429937 | 92709 | 324 | 5.013559 | 16.24393116 | Candidatus Nitrospira inopinata | 1715989 | Bacteria | Bacteria | 255 | 2.16e-63 | NTclustered | gi|952974062|emb|LN885086.1| | 1715989 | g70123 | i0 | 93.567 | 207.833333333333 | 171 | 11 | 53 | 0 | 1 | 171 | 1781595 | 1781425 | Nitrospira sp. ENR4 genome assembly NiCh1, chromosome : 1 | blastn | 67338 | 255 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira inopinata | ||
| 11904835 | 11904835 | PRJNA429937_P_NODE_15710_length_926_cov_22.208473_g9285_i0 | PRJNA429937 | 15710 | 926 | 22.208473 | 205.65045998 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 933 | 0 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g9285 | i0 | 85.73 | 3.39740820734341 | 883 | 126 | 95 | 0 | 20 | 902 | 304795 | 303913 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 3146 | 933 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 15729701 | 15729701 | PRJNA429937_P_NODE_58353_length_455_cov_4.352113_g39053_i0 | PRJNA429937 | 58353 | 455 | 4.352113 | 19.80211415 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 525 | 2.1599999999999992e-144 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g39053 | i0 | 89.26 | 0.920879120879121 | 419 | 45 | 92 | 0 | 23 | 441 | 3091134 | 3090716 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 419 | 525 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 17005004 | 17005004 | PRJNA429937_P_NODE_9894_length_1150_cov_3.756467_g5815_i0 | PRJNA429937 | 9894 | 1150 | 3.756467 | 43.1993705 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 340 | 2.23e-88 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g5815 | i0 | 84.866 | 0.29304347826087 | 337 | 51 | 29 | 0 | 524 | 860 | 2197522 | 2197858 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 337 | 340 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 18278433 | 18278433 | PRJNA429937_P_NODE_4695_length_1569_cov_4.323377_g2777_i0 | PRJNA429937 | 4695 | 1569 | 4.323377 | 67.83378513 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 1053 | 0 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g2777 | i0 | 83.659 | 1.23199490121096 | 1126 | 177 | 82 | 7 | 168 | 1289 | 1815351 | 1814229 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 1933 | 1053 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 19552078 | 19552078 | PRJNA429937_P_NODE_1956_length_2146_cov_4.380727_g1174_i0 | PRJNA429937 | 1956 | 2146 | 4.380727 | 94.01040142 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 634 | 1.7299999999999994e-176 | NTclustered | gi|2290911150|gb|CP060501.1| | 70125 | g1174 | i0 | 79.109 | 1.96738117427773 | 943 | 180 | 44 | 10 | 2 | 936 | 1437590 | 1436657 | MAG: Nitrospira sp. isolate NSFW chromosome, complete genome | blastn | 4222 | 634 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 19552890 | 19552890 | PRJNA429937_P_NODE_54956_length_473_cov_3.684685_g36419_i0 | PRJNA429937 | 54956 | 473 | 3.684685 | 17.42856005 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 473 | 8.289999999999999e-129 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g36419 | i0 | 86.27 | 0.923890063424947 | 437 | 58 | 92 | 2 | 23 | 457 | 3259528 | 3259964 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 437 | 473 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 22102667 | 22102667 | PRJNA429937_P_NODE_16618_length_901_cov_4.932339_g9839_i0 | PRJNA429937 | 16618 | 901 | 4.932339 | 44.44037439 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 737 | 0 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g9839 | i0 | 81.88 | 0.980022197558269 | 883 | 152 | 98 | 7 | 23 | 901 | 960945 | 960067 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 883 | 737 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 22102980 | 22102980 | PRJNA429937_P_NODE_28658_length_681_cov_5.119632_g17314_i0 | PRJNA429937 | 28658 | 681 | 5.119632 | 34.86469392 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 632 | 1.9099999999999995e-176 | NTclustered | gi|2194428397|gb|CP092079.1| | 70125 | g17314 | i0 | 87.143 | 8.25697503671072 | 560 | 68 | 82 | 4 | 103 | 659 | 3197046 | 3197604 | MAG: Nitrospira sp. isolate UBC3 chromosome | blastn | 5623 | 632 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;