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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA429937" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA429937 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1702148 1702148 PRJNA429937_P_NODE_7242_length_1311_cov_15.304992_g4275_i0 PRJNA429937 7242 1311 15.304992 200.64844512 Sinonovacula constricta 98310 Mollusca Mollusca 54.7 0.037   NTclustered gi|937961735|gb|KR534869.1| 98310 g4275 i0 100 0.0221205186880244 29 0 2 0 1 29 5 33 Sinonovacula constricta insulin-like peptide 1 mRNA, complete cds blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Cardiida Solecurtidae Sinonovacula Sinonovacula constricta
3638298 3638298 PRJNA429937_P_NODE_117823_length_254_cov_1.968889_g95197_i0 PRJNA429937 117823 254 1.968889 5.00097806 Stylommatophora 6527 Mollusca Mollusca 222 1.66e-53   NTclustered gi|34369166|gb|AY145373.1| 145610 g95197 i0 99.187 69.4685039370079 123 1 76 0 132 254 282 404 Deroceras reticulatum 18S ribosomal RNA gene, partial sequence blastn 17645 222 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Agriolimacidae Deroceras Deroceras reticulatum
5529338 5529338 PRJNA429937_P_NODE_113405_length_265_cov_5.080508_g90782_i0 PRJNA429937 113405 265 5.080508 13.4633462 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.024   NTclustered gi|2912996298|dbj|AP039601.1| 145626 g90782 i0 100 0.105660377358491 28 0 11 0 49 76 42889480 42889453 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 20, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
5530863 5530863 PRJNA429937_P_NODE_65145_length_423_cov_4.111675_g44423_i0 PRJNA429937 65145 423 4.111675 17.39238525 Ruditapes philippinarum 129788 Mollusca Mollusca 63.9 1.88e-5   NTclustered gi|2616537603|ref|XM_060709397.1| 129788 g44423 i0 91.667 0.226950354609929 48 1 11 2 223 270 9215 9171 PREDICTED: Ruditapes philippinarum T-cell surface antigen CD2-like (LOC132724530), transcript variant X1, mRNA blastn 96 63.9 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Ruditapes Ruditapes philippinarum
18278371 18278371 PRJNA429937_P_NODE_43475_length_543_cov_8.885214_g27786_i0 PRJNA429937 43475 543 8.885214 48.24671202 Pomacea canaliculata 400727 Mollusca Mollusca 56.5 0.004   NTclustered gi|1397712978|ref|XM_025247868.1| 400727 g27786 i0 100 0.718232044198895 30 0 6 0 346 375 2316 2345 PREDICTED: Pomacea canaliculata uncharacterized LOC112569844 (LOC112569844), mRNA blastn 390 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Architaenioglossa Ampullariidae Pomacea Pomacea canaliculata
19551387 19551387 PRJNA429937_P_NODE_102336_length_295_cov_4.533835_g79722_i0 PRJNA429937 102336 295 4.533835 13.37481325 Anadara broughtonii 148819 Mollusca Mollusca 52.8 0.027   NTclustered gi|2170965484|dbj|LC593126.1| 148819 g79722 i0 100 0.0949152542372881 28 0 9 0 268 295 58 31 Anadara broughtonii GnRH mRNA for gonadotropin releasing hormone, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Arcoida Arcidae Anadara Anadara broughtonii
22102562 22102562 PRJNA429937_P_NODE_15058_length_947_cov_4.728758_g8886_i0 PRJNA429937 15058 947 4.728758 44.78133826 Idiosepius paradoxus 294707 Mollusca Mollusca 54.7 0.027   NTclustered gi|325504932|dbj|AB586703.1| 294707 g8886 i0 100 0.030623020063358 29 0 3 0 919 947 39 11 Idiosepius paradoxus cenG mRNA for centaurin gamma homolog, complete cds blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda   Idiosepiidae Idiosepius Idiosepius paradoxus
22103484 22103484 PRJNA429937_P_NODE_53758_length_479_cov_9.866667_g35539_i0 PRJNA429937 53758 479 9.866667 47.26133493 Mya arenaria 6604 Mollusca Mollusca 58.4 0.001   NTclustered gi|2427444258|ref|XM_052913222.1| 6604 g35539 i0 97.059 0.407098121085595 34 1 7 0 428 461 4208 4175 PREDICTED: Mya arenaria speract receptor-like (LOC128209257), transcript variant X2, mRNA blastn 195 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;