contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA429937" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 427310 | 427310 | PRJNA429937_P_NODE_72421_length_393_cov_4.403846_g50605_i0 | PRJNA429937 | 72421 | 393 | 4.403846 | 17.30711478 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 396 | 1.51e-105 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g50605 | i0 | 85.309 | 101.913486005089 | 388 | 52 | 98 | 5 | 1 | 385 | 752134 | 752519 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 40052 | 396 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 2976293 | 2976293 | PRJNA429937_P_NODE_110343_length_273_cov_4.766393_g87721_i0 | PRJNA429937 | 110343 | 273 | 4.766393 | 13.01225289 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 278 | 3.8e-70 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g87721 | i0 | 85.199 | 57.8608058608059 | 277 | 34 | 100 | 7 | 1 | 273 | 1101650 | 1101923 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 15796 | 278 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 2977144 | 2977144 | PRJNA429937_P_NODE_31083_length_652_cov_7.662921_g18959_i0 | PRJNA429937 | 31083 | 652 | 7.662921 | 49.96224492 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 486 | 1.5e-132 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g18959 | i0 | 86.667 | 59.3726993865031 | 450 | 46 | 69 | 12 | 28 | 474 | 3042943 | 3042505 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 38711 | 486 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 6805143 | 6805143 | PRJNA429937_P_NODE_77926_length_373_cov_3.101744_g55653_i0 | PRJNA429937 | 77926 | 373 | 3.101744 | 11.56950512 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 87.9 | 9.73e-13 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g55653 | i0 | 93.333 | 0.160857908847185 | 60 | 3 | 16 | 1 | 56 | 115 | 3507559 | 3507501 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 60 | 87.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 6805284 | 6805284 | PRJNA429937_P_NODE_86486_length_345_cov_2.205696_g63938_i0 | PRJNA429937 | 86486 | 345 | 2.205696 | 7.6096512 | uncultured Gemmatimonadaceae bacterium | 246130 | Bacteria | Bacteria | 113 | 1.48e-20 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g63938 | i0 | 84.167 | 28.1188405797101 | 120 | 15 | 34 | 4 | 223 | 340 | 3082163 | 3082046 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 9701 | 113 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 8079045 | 8079045 | PRJNA429937_P_NODE_120207_length_248_cov_1.684932_g97581_i0 | PRJNA429937 | 120207 | 248 | 1.684932 | 4.17863136 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 91.6 | 4.75e-14 | NTclustered | gi|2108314823|gb|CP070670.1| | 2026742 | g97581 | i0 | 94.828 | 12.9798387096774 | 58 | 3 | 23 | 0 | 86 | 143 | 1009394 | 1009451 | MAG: Gemmatimonadetes bacterium isolate bin741 chromosome | blastn | 3219 | 91.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 8079357 | 8079357 | PRJNA429937_P_NODE_154587_length_165_cov_1.823529_g131960_i0 | PRJNA429937 | 154587 | 165 | 1.823529 | 3.00882285 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 172 | 1.02e-38 | NTclustered | gi|2874254163|emb|OY970395.1| | 412054 | g131960 | i0 | 85.542 | 91.4727272727273 | 166 | 22 | 100 | 2 | 1 | 165 | 3369770 | 3369934 | MAG: uncultured Gemmatimonadales bacterium isolate MFD05684.bin.c.1 genome assembly, chromosome: 1 | blastn | 15093 | 172 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10015471 | 10015471 | PRJNA429937_P_NODE_150468_length_180_cov_2.993377_g127841_i0 | PRJNA429937 | 150468 | 180 | 2.993377 | 5.3880786 | FCB group | 1783270 | Bacteria | Bacteria | 207 | 3.08e-49 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g127841 | i0 | 88.757 | 90.9777777777778 | 169 | 19 | 94 | 0 | 7 | 175 | 1445991 | 1445823 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 16376 | 207 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 10630389 | 10630389 | PRJNA429937_P_NODE_33289_length_629_cov_2.918333_g20506_i0 | PRJNA429937 | 33289 | 629 | 2.918333 | 18.35631457 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 87.9 | 1.71e-12 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g20506 | i0 | 93.333 | 0.095389507154213 | 60 | 3 | 10 | 1 | 56 | 115 | 3507559 | 3507501 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 60 | 87.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 12566488 | 12566488 | PRJNA429937_P_NODE_63170_length_432_cov_3.503722_g32814_i6 | PRJNA429937 | 63170 | 432 | 3.503722 | 15.13607904 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 62.1 | 6.93e-5 | NTclustered | gi|575461033|gb|CP007129.1| | 861299 | g32814 | i6 | 95 | 1.33101851851852 | 40 | 1 | 9 | 1 | 4 | 42 | 984589 | 984550 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence | blastn | 575 | 62.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 13181273 | 13181273 | PRJNA429937_P_NODE_8911_length_1201_cov_7.524744_g5247_i0 | PRJNA429937 | 8911 | 1201 | 7.524744 | 90.37217544 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 885 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g5247 | i0 | 89.437 | 107.751873438801 | 710 | 63 | 91 | 12 | 94 | 795 | 3043861 | 3043156 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 129410 | 885 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 15728543 | 15728543 | PRJNA429937_P_NODE_13653_length_991_cov_5.138254_g5247_i1 | PRJNA429937 | 13653 | 991 | 5.138254 | 50.92009714 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 785 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g5247 | i1 | 89.711 | 118.562058526741 | 622 | 55 | 62 | 9 | 282 | 898 | 3043244 | 3043861 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 117495 | 785 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 16390228 | 16390228 | PRJNA429937_P_NODE_74433_length_385_cov_10.946629_g52415_i0 | PRJNA429937 | 74433 | 385 | 10.946629 | 42.14452165 | Gemmatirosa | 1706036 | Bacteria | Bacteria | 401 | 3.169999999999999e-107 | NTclustered | gi|2874253995|emb|OY970320.1| | 246130 | g52415 | i0 | 86.154 | 98.8051948051948 | 390 | 32 | 100 | 13 | 1 | 385 | 232053 | 231681 | MAG: uncultured Gemmatimonadaceae bacterium isolate MFD00031.bin.c.2 genome assembly, chromosome: 1 | blastn | 38040 | 403 | 0.995037220843672 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | uncultured Gemmatimonadaceae bacterium | ||
| 18277303 | 18277303 | PRJNA429937_P_NODE_113475_length_265_cov_3.470339_g90852_i0 | PRJNA429937 | 113475 | 265 | 3.470339 | 9.19639835 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 58.4 | 5.21e-4 | NTclustered | gi|2108151088|gb|CP070722.1| | 2026742 | g90852 | i0 | 94.595 | 0.139622641509434 | 37 | 2 | 14 | 0 | 185 | 221 | 383548 | 383584 | MAG: Gemmatimonadetes bacterium isolate bin464 chromosome | blastn | 37 | 58.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 18278135 | 18278135 | PRJNA429937_P_NODE_32615_length_635_cov_7.599010_g20027_i0 | PRJNA429937 | 32615 | 635 | 7.59901 | 48.2537135 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 486 | 1.4599999999999997e-132 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g20027 | i0 | 86.667 | 60.9527559055118 | 450 | 46 | 70 | 12 | 28 | 474 | 3042943 | 3042505 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 38705 | 486 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 24652654 | 24652654 | PRJNA429937_P_NODE_26580_length_710_cov_6.317181_g5247_i5 | PRJNA429937 | 26580 | 710 | 6.317181 | 44.8519851 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 808 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g5247 | i5 | 90.338 | 161.825352112676 | 621 | 53 | 87 | 7 | 94 | 710 | 3043861 | 3043244 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 114896 | 808 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 24652918 | 24652918 | PRJNA429937_P_NODE_37220_length_592_cov_6.822380_g5247_i6 | PRJNA429937 | 37220 | 592 | 6.82238 | 40.3884896 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 503 | 1.3399999999999996e-137 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g5247 | i6 | 88.571 | 62.6570945945946 | 420 | 41 | 80 | 7 | 177 | 592 | 3043861 | 3043445 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 37093 | 503 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 24653650 | 24653650 | PRJNA429937_P_NODE_75780_length_380_cov_11.393162_g53643_i0 | PRJNA429937 | 75780 | 380 | 11.393162 | 43.2940156 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 398 | 4.0399999999999992e-106 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g53643 | i0 | 86.34 | 85.5315789473684 | 388 | 26 | 100 | 16 | 1 | 380 | 3042727 | 3043095 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 32502 | 398 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;